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The map label for this gene is yahN [H]

Identifier: 59713821

GI number: 59713821

Start: 715230

End: 715859

Strand: Reverse

Name: yahN [H]

Synonym: VF_A0638

Alternate gene names: 59713821

Gene position: 715859-715230 (Counterclockwise)

Preceding gene: 59713822

Following gene: 59713820

Centisome position: 53.81

GC content: 36.51

Gene sequence:

>630_bases
ATGGAATATTTATTGGTTCTTATTCATGTGGCTTTAATTTGGATGCTAGCTGTCGCAACCCCTGGTTCTAATGTCCTTTT
AACGATCAACACTGCACTTAATTACGACCGTAAAATTGCGGCTTTTTCTGCTTTCGGTGTTAGTTTTGCGACGTTACTGT
GGTCGTTTTTTGGTGGCTCTGGATTAGTTATTCTCTTTTCACATTTTCCTCAATTATTTGGTTTAATGAAAGTGTTAGGT
GGCAGTTATTTATTGTATTTGGGAATGCGTCAGATTTATCTAACTCGAAAAATAAAGAGGTTAGGTGAGTTAACAGAAAT
CAATCAAACGATATCACCATCGAAAAGGAAGGTTTTCATTTCAGCGTTTATCACCAGTATTTTAAATCCGAAAACGGGTT
TCTTCGTTGTCAGTTTATTTAGTGTTTCCATGCCTGAAAACATGAGTGCAACGATGATATTTGCGATCATGCTAACAATG
GTCTCAATTACGCTTAGTTGGCATTTATTTTTAGCTACGGCGTTTTCCCATGAATCAACTAAAAGTGTTTATGCTCGTAT
TTCTGGGGTTATGGATTATGTCACAGGTGGATTGTTTACCATTTTTGGCATTAAAGTAATGACCTCATAG

Upstream 100 bases:

>100_bases
TTAAGTGGTAAATTTAGGCTTAATCTGAATGGTAGCAAACGTGTTATGCAGGCGTTATATGCATTTTAAGCTCAAGGGCT
ATTTTATTGGATTGTAGATA

Downstream 100 bases:

>100_bases
TAAGAATGGTTGTTTGCATATAACAAATGCATCAACACGATTTACTACACTCGGCAATCTCAGTTTGCCGGGTGTTTCTC
GTTTTAAGGCATCAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEYLLVLIHVALIWMLAVATPGSNVLLTINTALNYDRKIAAFSAFGVSFATLLWSFFGGSGLVILFSHFPQLFGLMKVLG
GSYLLYLGMRQIYLTRKIKRLGELTEINQTISPSKRKVFISAFITSILNPKTGFFVVSLFSVSMPENMSATMIFAIMLTM
VSITLSWHLFLATAFSHESTKSVYARISGVMDYVTGGLFTIFGIKVMTS

Sequences:

>Translated_209_residues
MEYLLVLIHVALIWMLAVATPGSNVLLTINTALNYDRKIAAFSAFGVSFATLLWSFFGGSGLVILFSHFPQLFGLMKVLG
GSYLLYLGMRQIYLTRKIKRLGELTEINQTISPSKRKVFISAFITSILNPKTGFFVVSLFSVSMPENMSATMIFAIMLTM
VSITLSWHLFLATAFSHESTKSVYARISGVMDYVTGGLFTIFGIKVMTS
>Mature_209_residues
MEYLLVLIHVALIWMLAVATPGSNVLLTINTALNYDRKIAAFSAFGVSFATLLWSFFGGSGLVILFSHFPQLFGLMKVLG
GSYLLYLGMRQIYLTRKIKRLGELTEINQTISPSKRKVFISAFITSILNPKTGFFVVSLFSVSMPENMSATMIFAIMLTM
VSITLSWHLFLATAFSHESTKSVYARISGVMDYVTGGLFTIFGIKVMTS

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=191, Percent_Identity=26.1780104712042, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI48994978, Length=206, Percent_Identity=25.2427184466019, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788099, Length=195, Percent_Identity=28.2051282051282, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23158; Mature: 23158

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLLVLIHVALIWMLAVATPGSNVLLTINTALNYDRKIAAFSAFGVSFATLLWSFFGGS
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GLVILFSHFPQLFGLMKVLGGSYLLYLGMRQIYLTRKIKRLGELTEINQTISPSKRKVFI
CEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SAFITSILNPKTGFFVVSLFSVSMPENMSATMIFAIMLTMVSITLSWHLFLATAFSHEST
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
KSVYARISGVMDYVTGGLFTIFGIKVMTS
HHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MEYLLVLIHVALIWMLAVATPGSNVLLTINTALNYDRKIAAFSAFGVSFATLLWSFFGGS
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GLVILFSHFPQLFGLMKVLGGSYLLYLGMRQIYLTRKIKRLGELTEINQTISPSKRKVFI
CEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SAFITSILNPKTGFFVVSLFSVSMPENMSATMIFAIMLTMVSITLSWHLFLATAFSHEST
HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
KSVYARISGVMDYVTGGLFTIFGIKVMTS
HHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]