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The map label for this gene is ygeA [H]

Identifier: 59713807

GI number: 59713807

Start: 703278

End: 703982

Strand: Reverse

Name: ygeA [H]

Synonym: VF_A0624

Alternate gene names: 59713807

Gene position: 703982-703278 (Counterclockwise)

Preceding gene: 59713808

Following gene: 59713806

Centisome position: 52.92

GC content: 36.31

Gene sequence:

>705_bases
ATGAAAACAATTGGAATGTTAGGTGGCATGAGTTGGGAATCCACTGCAAGTTATTACAAAGCTATTAATGAAGGCATAAA
AGATGAACTTGGTGGCCTTAATTCTGCGAAAATCTGCCTATACAGCGTGAACTTTGATGAAATTGAAAAATTACAACATC
AGGGGGAATGGGATGAAACTGCATTAATTCTTGTTGAAGCTGCGAAATCGGTTGAAGCTGGTGGCGCTGATTTCCTAATT
ATTTGTACTAACACTATGCATAAAGTTGCACCTGAAATTGAAAGTAATATATCAATTCCAATTCTTCATATTGCCGATGC
AACAGCTAATAAATTGGTTATCAATGGCATTAAAAAAGTTGGCTTGCTTGGTACCCGTTTTACTATGGAGCAGGATTTCT
ATAAAAGTCGTTTGGCCGAAAAATTTGGTATTGAAGTTGTTGTGCCAGAAGAGAATGATCGTACGACTGTTCATAACATC
ATTTACGACGAATTGTGTAGAGGTGTAATAAACTCAGATTCAAGAGAAAAGTATTTAAGTATCGTTAAAAGTTTGCATGA
GCAGGGTGCTGAAGCTGTAATTTTAGGTAGTACTGAAATTGCTCTACTTATTCAGCAAGCATATACAGAAGTTCCATTAT
ACGACATAACTGAAATTCATGCGGCTCAAGCTGTACAATTAGCGATTTCAGGTGTTGCAATATAA

Upstream 100 bases:

>100_bases
CATTCTAATTCCTTTGTGTTTACCGTATTTAGTGGTAAGTTTGCATGGCAGAAAACGTATTATATACGCGTTATATTACT
TTTAAGGAATGAAGTACAAG

Downstream 100 bases:

>100_bases
CAAATGCATCAACACGATTTGCTACACTCGACAATCTCATTTTGCCGGGTGTTTATCGTTTTAATACGTCAATTTTGACT
ATGACCGAATCGTCGTAAAT

Product: racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKTIGMLGGMSWESTASYYKAINEGIKDELGGLNSAKICLYSVNFDEIEKLQHQGEWDETALILVEAAKSVEAGGADFLI
ICTNTMHKVAPEIESNISIPILHIADATANKLVINGIKKVGLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNI
IYDELCRGVINSDSREKYLSIVKSLHEQGAEAVILGSTEIALLIQQAYTEVPLYDITEIHAAQAVQLAISGVAI

Sequences:

>Translated_234_residues
MKTIGMLGGMSWESTASYYKAINEGIKDELGGLNSAKICLYSVNFDEIEKLQHQGEWDETALILVEAAKSVEAGGADFLI
ICTNTMHKVAPEIESNISIPILHIADATANKLVINGIKKVGLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNI
IYDELCRGVINSDSREKYLSIVKSLHEQGAEAVILGSTEIALLIQQAYTEVPLYDITEIHAAQAVQLAISGVAI
>Mature_234_residues
MKTIGMLGGMSWESTASYYKAINEGIKDELGGLNSAKICLYSVNFDEIEKLQHQGEWDETALILVEAAKSVEAGGADFLI
ICTNTMHKVAPEIESNISIPILHIADATANKLVINGIKKVGLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNI
IYDELCRGVINSDSREKYLSIVKSLHEQGAEAVILGSTEIALLIQQAYTEVPLYDITEIHAAQAVQLAISGVAI

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=51.7391304347826, Blast_Score=257, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25643; Mature: 25643

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGMLGGMSWESTASYYKAINEGIKDELGGLNSAKICLYSVNFDEIEKLQHQGEWDET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHH
ALILVEAAKSVEAGGADFLIICTNTMHKVAPEIESNISIPILHIADATANKLVINGIKKV
HEEEEEHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
GLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNIIYDELCRGVINSDSREKYLS
HCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
IVKSLHEQGAEAVILGSTEIALLIQQAYTEVPLYDITEIHAAQAVQLAISGVAI
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTIGMLGGMSWESTASYYKAINEGIKDELGGLNSAKICLYSVNFDEIEKLQHQGEWDET
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCHH
ALILVEAAKSVEAGGADFLIICTNTMHKVAPEIESNISIPILHIADATANKLVINGIKKV
HEEEEEHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
GLLGTRFTMEQDFYKSRLAEKFGIEVVVPEENDRTTVHNIIYDELCRGVINSDSREKYLS
HCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
IVKSLHEQGAEAVILGSTEIALLIQQAYTEVPLYDITEIHAAQAVQLAISGVAI
HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]