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The map label for this gene is 59713669

Identifier: 59713669

GI number: 59713669

Start: 560503

End: 560739

Strand: Reverse

Name: 59713669

Synonym: VF_A0486

Alternate gene names: NA

Gene position: 560739-560503 (Counterclockwise)

Preceding gene: 59713670

Following gene: 59713668

Centisome position: 42.15

GC content: 34.6

Gene sequence:

>237_bases
ATGAAATTACTTGTTCGCAATCTTCCTCGTACTATGTCTGAATTTGAACTACGTGAAATGTTTAAAAAACACGGAGAATT
TAAATACTGCAAAATAGTATTAGACGAAATTACAGGTGAATCAAAAGGATTTGGTTTTGTTGAAATGCTTGACGAAGAAG
AAGCATTAGCAGCAATCGCCGCTGAAGATGGCAAAAAGTTTGGTAAACTTAAAATCCGCGTAAAAGCAGCTGAATAA

Upstream 100 bases:

>100_bases
CGAAATGGCTTAATCGCTATTTCGGATTTTCTATTTTGCATATACCCAGAACCGAATTTCTGCTATAACGTACTCTTAAA
TCACTATTATATGGTTAATC

Downstream 100 bases:

>100_bases
TCATTTGCTTTTGTCAATGACCATCAATCGCTATTCATCCATTAATGGTCATTGGTATTGCTGTGGTTTGATATAATATC
GAACCACGCACTCTTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGESKGFGFVEMLDEEEALAAIAAEDGKKFGKLKIRVKAAE

Sequences:

>Translated_78_residues
MKLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGESKGFGFVEMLDEEEALAAIAAEDGKKFGKLKIRVKAAE
>Mature_78_residues
MKLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGESKGFGFVEMLDEEEALAAIAAEDGKKFGKLKIRVKAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532863, Length=75, Percent_Identity=38.6666666666667, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221330653, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330652, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI62471589, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19549692, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19549688, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19549690, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19549694, Length=75, Percent_Identity=41.3333333333333, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8941; Mature: 8941

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGESKGFGFVEMLDEEEALAAIA
CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH
AEDGKKFGKLKIRVKAAE
HHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGESKGFGFVEMLDEEEALAAIA
CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH
AEDGKKFGKLKIRVKAAE
HHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA