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The map label for this gene is ompU2 [H]

Identifier: 59713670

GI number: 59713670

Start: 560885

End: 561808

Strand: Reverse

Name: ompU2 [H]

Synonym: VF_A0487

Alternate gene names: 59713670

Gene position: 561808-560885 (Counterclockwise)

Preceding gene: 59713671

Following gene: 59713669

Centisome position: 42.23

GC content: 38.64

Gene sequence:

>924_bases
ATGAAAAAATTACTACTATCAACGGCTATCGTTTCATCTTTTGTATCAACTCCTCTTTTAGCAGCTACGGTTTACGATCA
AGATGACACTCAATTAAAAGTTGGTGGCAGAGCCGAAGCACGTGCAAATATTTCTGATAATAATGAATCAGCAACCGAGA
GCTCATTTCAAGATAAGAGCCGTGCACGCATTAATTTAAAAGGTAAAACCAAAATTAATGAAGATTTAGGTGCGTTTGGT
ACTTATGAAGTCGAAATTGCTGATGGAAAAAACAATCTAGTGAATACCCGTTATCTATTTGCTGGTCTAAGTACTGCCTT
TGGCAATTTCTCATACGGACAACAAGATTCTGCACAAGTAATGCTTACTGATTATACTGATATTTTAGCCACTTTTGGTG
GTGATGCTGCAGACTTAACGGATGGTAACAAAGATAAACGTGAGAATAACTTTGTATACTCTGGTGAATTCGATGCTCTA
ACCGTGCAAGCAAACTACATTGCAAGTAATACTAAGAAAAGTGATAGCTTTGGCCTATCTGGCATGTATGCCCTACCAAT
TGGCTTAGATTTGGGTTTAGGTTATGCCTCTGGTGAACAAGCTGGGCTAGATGCCGACCAAATTAACCTTGCCCTTCGCT
ACACACTTGATGCGTTCATGGTTTCAGGTTTATTCACAACAGGTGAAATCGACAAGATCGATGCTGCCGGTTACGAACTC
GCCGCCGCTTATAAAATGGATAAATGGGTGTTTCAAGGCGTTTATAACTACCAAGAAGTTGATAGCAAAGACACTGAAAT
CAACGTTGCTATTGAAGCTATCTACAAGCTAAACAAAAGTTTCCGCACATATGCAGGATACAAATTTGAACAAATTGATG
ATTTAGATGATCAAATTCAATTTGGTCTACGCTACGATTTCTAA

Upstream 100 bases:

>100_bases
AACTTACATCAATCTTTAATATGAATTTTCTATCTTAGATCCCAAGCAAATAACTAGGCCAAAACGGGGTGTTTTGGTTA
ATTTAAGGGTATGGAATCTA

Downstream 100 bases:

>100_bases
GTTTTATGAATTTTAGCACTCTGGGTGGAGGGCTAAAACCAAATCCGAAATGGCTTAATCGCTATTTCGGATTTTCTATT
TTGCATATACCCAGAACCGA

Product: outer membrane protein U paralog, OmpU2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKKLLLSTAIVSSFVSTPLLAATVYDQDDTQLKVGGRAEARANISDNNESATESSFQDKSRARINLKGKTKINEDLGAFG
TYEVEIADGKNNLVNTRYLFAGLSTAFGNFSYGQQDSAQVMLTDYTDILATFGGDAADLTDGNKDKRENNFVYSGEFDAL
TVQANYIASNTKKSDSFGLSGMYALPIGLDLGLGYASGEQAGLDADQINLALRYTLDAFMVSGLFTTGEIDKIDAAGYEL
AAAYKMDKWVFQGVYNYQEVDSKDTEINVAIEAIYKLNKSFRTYAGYKFEQIDDLDDQIQFGLRYDF

Sequences:

>Translated_307_residues
MKKLLLSTAIVSSFVSTPLLAATVYDQDDTQLKVGGRAEARANISDNNESATESSFQDKSRARINLKGKTKINEDLGAFG
TYEVEIADGKNNLVNTRYLFAGLSTAFGNFSYGQQDSAQVMLTDYTDILATFGGDAADLTDGNKDKRENNFVYSGEFDAL
TVQANYIASNTKKSDSFGLSGMYALPIGLDLGLGYASGEQAGLDADQINLALRYTLDAFMVSGLFTTGEIDKIDAAGYEL
AAAYKMDKWVFQGVYNYQEVDSKDTEINVAIEAIYKLNKSFRTYAGYKFEQIDDLDDQIQFGLRYDF
>Mature_307_residues
MKKLLLSTAIVSSFVSTPLLAATVYDQDDTQLKVGGRAEARANISDNNESATESSFQDKSRARINLKGKTKINEDLGAFG
TYEVEIADGKNNLVNTRYLFAGLSTAFGNFSYGQQDSAQVMLTDYTDILATFGGDAADLTDGNKDKRENNFVYSGEFDAL
TVQANYIASNTKKSDSFGLSGMYALPIGLDLGLGYASGEQAGLDADQINLALRYTLDAFMVSGLFTTGEIDKIDAAGYEL
AAAYKMDKWVFQGVYNYQEVDSKDTEINVAIEAIYKLNKSFRTYAGYKFEQIDDLDDQIQFGLRYDF

Specific function: Uptake Of Inorganic Phosphate, Phosphorylated Compounds, And Some Other Negatively Charged Solutes. [C]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1786436, Length=361, Percent_Identity=27.4238227146814, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1787160, Length=367, Percent_Identity=28.3378746594005, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787641, Length=359, Percent_Identity=26.4623955431755, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788544, Length=377, Percent_Identity=25.7294429708223, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 794 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 33732; Mature: 33732

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLSTAIVSSFVSTPLLAATVYDQDDTQLKVGGRAEARANISDNNESATESSFQDKS
CCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCEECCCCCCCCCHHHHHHCCCC
RARINLKGKTKINEDLGAFGTYEVEIADGKNNLVNTRYLFAGLSTAFGNFSYGQQDSAQV
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEE
MLTDYTDILATFGGDAADLTDGNKDKRENNFVYSGEFDALTVQANYIASNTKKSDSFGLS
EEECHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCC
GMYALPIGLDLGLGYASGEQAGLDADQINLALRYTLDAFMVSGLFTTGEIDKIDAAGYEL
CEEEEEEEEEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEE
AAAYKMDKWVFQGVYNYQEVDSKDTEINVAIEAIYKLNKSFRTYAGYKFEQIDDLDDQIQ
EHHHHHHHHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEE
FGLRYDF
ECEEECC
>Mature Secondary Structure
MKKLLLSTAIVSSFVSTPLLAATVYDQDDTQLKVGGRAEARANISDNNESATESSFQDKS
CCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCEECCCCCCCCCHHHHHHCCCC
RARINLKGKTKINEDLGAFGTYEVEIADGKNNLVNTRYLFAGLSTAFGNFSYGQQDSAQV
CEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCEE
MLTDYTDILATFGGDAADLTDGNKDKRENNFVYSGEFDALTVQANYIASNTKKSDSFGLS
EEECHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCC
GMYALPIGLDLGLGYASGEQAGLDADQINLALRYTLDAFMVSGLFTTGEIDKIDAAGYEL
CEEEEEEEEEECCCCCCCCCCCCCHHHEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEE
AAAYKMDKWVFQGVYNYQEVDSKDTEINVAIEAIYKLNKSFRTYAGYKFEQIDDLDDQIQ
EHHHHHHHHHHHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEE
FGLRYDF
ECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8759872 [H]