| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is hutU [H]
Identifier: 59713634
GI number: 59713634
Start: 518997
End: 520691
Strand: Reverse
Name: hutU [H]
Synonym: VF_A0451
Alternate gene names: 59713634
Gene position: 520691-518997 (Counterclockwise)
Preceding gene: 59713635
Following gene: 59713633
Centisome position: 39.14
GC content: 43.89
Gene sequence:
>1695_bases ATGACACAAACATCATCTAACCCTAGACTGGATGAGTCTCGTACTATCATTGCACCGACAGGAATCGAGTTAACGGCTAA ATCATGGTTAACAGAAGCCCCACTTCGAATGCTCATGAATAATTTACATCCTGACGTCGCAGAACATCCCCACGCTTTGG TCGTTTATGGCGGTATTGGTCGTGCTGCACGAAACTGGCAATGCTACGATAAAATCATCGAAGTGTTAACTCGTCTAGAA GATGATGAAACCTTAATGGTGCAATCAGGTAAACCCGTTGGAGTATTTAAAACTCACACTAACGCACCACGAGTATTAAT CGCTAATTCCAATTTAGTCCCTCATTGGGCTAATTGGGCACATTTTAATGAACTCGATAAGCAAGGTTTGATGATGTACG GTCAAATGACGGCTGGCAGTTGGATCTACATTGGGTCACAAGGTATTGTTCAAGGAACTTACGAAACTTTTATTGCAATG GCAAAGCAGCATTTTAATGGTGATACACAAGGTCGCTGGATCCTAACTGGTGGGCTTGGCGGTATGGGAGGTGCTCAACC TCTTGCTGCAACCATGGCTGGCTTCTCAATGCTAGCGGTTGAGTGTGATGAATCTCGTATCGATTACCGTCTCCGTACAG GCTATGTAGACCGTAAAGCGACAACACTCAGTGAAGCCCTCTCTATCATTGAAGAAGCAAAACGTTCTAGCTCTCCTATT TCTGTTGGTTTATTAGGTAATGCTGCTGATGTCTATGCTGAAATTGTAAAACGTGGAATTGTTCCTGACATTACTACTGA CCAAACATCTGCTCACGACCCTCTTAATGGTTATTTACCTCAAGGATGGTCAATGGATGGCGCAGCAAAAATGCGCTTAA AAGATGAAATCAATGTAGTGAATGCAGCAAAACAATCAATGGCTGTTCAAGTAGAGGCAATGCTATCTCTTCAAAAATCA GGCTCAGCAACGGTAGATTATGGCAACAATATTCGACAAATGGCTTTTGAAGAAGGCATCACTAATGCCTTTGATTTCCC TGGATTCGTTCCAGCTTATATTCGTCCTCTATTTTGTGAAGGTATAGGACCATTTCGCTGGGCAGCTCTATCTGGTGATC CTGAAGATATTTACAAAACCGACCAAAAAGTAAAAGAACTGATCCCTGATAATCCACACCTTCACAATTGGTTAGACATG GCACGTGAACGCATTCAATTTCAAGGGTTACCTGCACGTATCTGCTGGGTTGGACTAAAAGATCGTGCTCGTCTCGGTAA AGCATTCAATGAGATGGTAAAAAATGGAGAGTTAAAAGCTCCTATCGTCATTGGTCGTGATCATCTTGACTCCGGCTCTG TCGCCAGCCCAAACCGTGAGACCGAAGACATGATGGATGGTTCAGATGCCGTGTCTGACTGGCCGCTATTAAACGCCCTA CTCAATACCGCCTCAGGAGCAACGTGGGTATCCTTACACCATGGTGGAGGCGTCGGCATGGGTTTCTCACAACATTCAGG TATGGTCATCGTATGTGATGGAACTGATGAGGCAACTGAACGTGTCAGTCGAGTATTACATAATGACCCAGCAACGGGCG TAATGCGACATGCTGATGCGGGTTATGATATAGCGATCAATTGTGCAAAAGAACAAAACCTAGATTTACCTATGTTATCC ATACCTAACAAATAA
Upstream 100 bases:
>100_bases CTTTGATATTGATAATCAAACGGCACGTTTAGTTGCTCGGCTCGTTTGGACCATCGCTCACGGTATGAAATCAAATATGT AATAGCAAGGAGAAGCAATA
Downstream 100 bases:
>100_bases ATTAATACTAATAAAAATAAAACTATAATGAGAAGAAAACTATGTATTCATTAGAAATTATTCCAGGTAAATTATCACTA AAACAATTACGTGAAGTTAG
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTQTSSNPRLDESRTIIAPTGIELTAKSWLTEAPLRMLMNNLHPDVAEHPHALVVYGGIGRAARNWQCYDKIIEVLTRLE DDETLMVQSGKPVGVFKTHTNAPRVLIANSNLVPHWANWAHFNELDKQGLMMYGQMTAGSWIYIGSQGIVQGTYETFIAM AKQHFNGDTQGRWILTGGLGGMGGAQPLAATMAGFSMLAVECDESRIDYRLRTGYVDRKATTLSEALSIIEEAKRSSSPI SVGLLGNAADVYAEIVKRGIVPDITTDQTSAHDPLNGYLPQGWSMDGAAKMRLKDEINVVNAAKQSMAVQVEAMLSLQKS GSATVDYGNNIRQMAFEEGITNAFDFPGFVPAYIRPLFCEGIGPFRWAALSGDPEDIYKTDQKVKELIPDNPHLHNWLDM ARERIQFQGLPARICWVGLKDRARLGKAFNEMVKNGELKAPIVIGRDHLDSGSVASPNRETEDMMDGSDAVSDWPLLNAL LNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEATERVSRVLHNDPATGVMRHADAGYDIAINCAKEQNLDLPMLS IPNK
Sequences:
>Translated_564_residues MTQTSSNPRLDESRTIIAPTGIELTAKSWLTEAPLRMLMNNLHPDVAEHPHALVVYGGIGRAARNWQCYDKIIEVLTRLE DDETLMVQSGKPVGVFKTHTNAPRVLIANSNLVPHWANWAHFNELDKQGLMMYGQMTAGSWIYIGSQGIVQGTYETFIAM AKQHFNGDTQGRWILTGGLGGMGGAQPLAATMAGFSMLAVECDESRIDYRLRTGYVDRKATTLSEALSIIEEAKRSSSPI SVGLLGNAADVYAEIVKRGIVPDITTDQTSAHDPLNGYLPQGWSMDGAAKMRLKDEINVVNAAKQSMAVQVEAMLSLQKS GSATVDYGNNIRQMAFEEGITNAFDFPGFVPAYIRPLFCEGIGPFRWAALSGDPEDIYKTDQKVKELIPDNPHLHNWLDM ARERIQFQGLPARICWVGLKDRARLGKAFNEMVKNGELKAPIVIGRDHLDSGSVASPNRETEDMMDGSDAVSDWPLLNAL LNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEATERVSRVLHNDPATGVMRHADAGYDIAINCAKEQNLDLPMLS IPNK >Mature_563_residues TQTSSNPRLDESRTIIAPTGIELTAKSWLTEAPLRMLMNNLHPDVAEHPHALVVYGGIGRAARNWQCYDKIIEVLTRLED DETLMVQSGKPVGVFKTHTNAPRVLIANSNLVPHWANWAHFNELDKQGLMMYGQMTAGSWIYIGSQGIVQGTYETFIAMA KQHFNGDTQGRWILTGGLGGMGGAQPLAATMAGFSMLAVECDESRIDYRLRTGYVDRKATTLSEALSIIEEAKRSSSPIS VGLLGNAADVYAEIVKRGIVPDITTDQTSAHDPLNGYLPQGWSMDGAAKMRLKDEINVVNAAKQSMAVQVEAMLSLQKSG SATVDYGNNIRQMAFEEGITNAFDFPGFVPAYIRPLFCEGIGPFRWAALSGDPEDIYKTDQKVKELIPDNPHLHNWLDMA RERIQFQGLPARICWVGLKDRARLGKAFNEMVKNGELKAPIVIGRDHLDSGSVASPNRETEDMMDGSDAVSDWPLLNALL NTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEATERVSRVLHNDPATGVMRHADAGYDIAINCAKEQNLDLPMLSI PNK
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=570, Percent_Identity=32.9824561403509, Blast_Score=301, Evalue=9e-82, Organism=Homo sapiens, GI260306182, Length=364, Percent_Identity=31.3186813186813, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71997891, Length=550, Percent_Identity=33.0909090909091, Blast_Score=306, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 61650; Mature: 61519
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSSNPRLDESRTIIAPTGIELTAKSWLTEAPLRMLMNNLHPDVAEHPHALVVYGGIG CCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCC RAARNWQCYDKIIEVLTRLEDDETLMVQSGKPVGVFKTHTNAPRVLIANSNLVPHWANWA CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCH HFNELDKQGLMMYGQMTAGSWIYIGSQGIVQGTYETFIAMAKQHFNGDTQGRWILTGGLG HHHHHCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC GMGGAQPLAATMAGFSMLAVECDESRIDYRLRTGYVDRKATTLSEALSIIEEAKRSSSPI CCCCCCHHHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCE SVGLLGNAADVYAEIVKRGIVPDITTDQTSAHDPLNGYLPQGWSMDGAAKMRLKDEINVV EEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH NAAKQSMAVQVEAMLSLQKSGSATVDYGNNIRQMAFEEGITNAFDFPGFVPAYIRPLFCE HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC GIGPFRWAALSGDPEDIYKTDQKVKELIPDNPHLHNWLDMARERIQFQGLPARICWVGLK CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH DRARLGKAFNEMVKNGELKAPIVIGRDHLDSGSVASPNRETEDMMDGSDAVSDWPLLNAL HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH LNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEATERVSRVLHNDPATGVMRHADA HHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCC GYDIAINCAKEQNLDLPMLSIPNK CCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TQTSSNPRLDESRTIIAPTGIELTAKSWLTEAPLRMLMNNLHPDVAEHPHALVVYGGIG CCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCC RAARNWQCYDKIIEVLTRLEDDETLMVQSGKPVGVFKTHTNAPRVLIANSNLVPHWANWA CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCH HFNELDKQGLMMYGQMTAGSWIYIGSQGIVQGTYETFIAMAKQHFNGDTQGRWILTGGLG HHHHHCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC GMGGAQPLAATMAGFSMLAVECDESRIDYRLRTGYVDRKATTLSEALSIIEEAKRSSSPI CCCCCCHHHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCE SVGLLGNAADVYAEIVKRGIVPDITTDQTSAHDPLNGYLPQGWSMDGAAKMRLKDEINVV EEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHH NAAKQSMAVQVEAMLSLQKSGSATVDYGNNIRQMAFEEGITNAFDFPGFVPAYIRPLFCE HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC GIGPFRWAALSGDPEDIYKTDQKVKELIPDNPHLHNWLDMARERIQFQGLPARICWVGLK CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH DRARLGKAFNEMVKNGELKAPIVIGRDHLDSGSVASPNRETEDMMDGSDAVSDWPLLNAL HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH LNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEATERVSRVLHNDPATGVMRHADA HHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCC GYDIAINCAKEQNLDLPMLSIPNK CCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA