| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is phoB [C]
Identifier: 59713442
GI number: 59713442
Start: 290138
End: 291238
Strand: Reverse
Name: phoB [C]
Synonym: VF_A0259
Alternate gene names: 59713442
Gene position: 291238-290138 (Counterclockwise)
Preceding gene: 59713443
Following gene: 59713440
Centisome position: 21.89
GC content: 28.88
Gene sequence:
>1101_bases ATGCTCAATAAAAATCTTATACGATTTAAAGATATAACGTTTAATCCAAAAACAAACCAAATAATTAAGAACGATTGCAC AATCAAGCTGACTCATAGTGAATCAAAAATTTTAAAATTACTTTTAACCTCTCCAAATAAGGTTTTCTCAAAAGATGAAA TCTTTACTCATGTTTGGGAAGGAACAGCAAGCAATATAGGTGTTGTACCACAGACGATTTCAGTTTTACGCAAAAAATTA CACTACAATGAAATATATCTAATTGAAACTGTTAAGAAAAAAGGCTATAAAGCAGATGTTAACGGTACTTTTTTCGAAAA AAGAAAGCTAAATAAGAATCATTTGTTTTTATCAATTACTATTATTATTTCCTTTTGTTTATCTCTAGTCGCTTTTGAAA AACATATATTAAATACGAAAAGCAGTGATGAAATAAAAATAGAAGAGTTAATGCCAAATGTATTTCAAACAAGTGATTCG CTACCATTTATCTTTGATCCAACTGTTTTAAGAAGTAACACAACTTATTACATAAACCGACAACCAAATAACTTAAACAT ATCAGCTTGTCGACAAATTGGAACGCACTGTGATTTAACATACAATAAAATTATATTTTTACAAAACAATGAATCAAATA CTGTTATAACTCAATATATTCAAGATGTTAAGTTCGCAGAAACAATGTATAAAGATGAATTAAATACAAACCCTATTCGA TTTAACTATGCAGCCCGAATAGGAGTCAAAAGTGAAAATGATAATTATTACAGTGGACAAGTAATTGCTAATTACAACTT GAAGCAAAGAAATAATAAATACGTTTATAATAAAGTATCTATTGTTATTGATGAAACTGGGTTTGCAGGACAATGCTCAT ACACTAGAGAACCGGAAAAACCTTTCCTTGAGTGCAATGAAGGTGACTGTGCAAGTTATGTTGGCTCTATATCTGATCCT AAAAAAGCGGTTGCATATAAAAACTTATTTCAATATCCCACAACTGGGTTAAACATTTTATTATTTCCAATAGATGACGA TGTATCCTTATTTTACAATACAGAATCTGGATTATCTTACTTAGTATATCAGTATAGCTAA
Upstream 100 bases:
>100_bases TATTGATAATGAAGTTTCTTTCTTGATATGCTTGCTGTTATAACAACAATAATATTAATAATCCTTTTAGTTTTTCAGTT TCCTTCTCTTAGGTTACATA
Downstream 100 bases:
>100_bases AATTAAAAATAGCCGTTAAATCAATCAGTAACGGCTATTATTTATAGCAAGTAGGTTTTCTAGGACAAACCGCCCCTCGA GAGCATATCACTTTAGCATC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFSKDEIFTHVWEGTASNIGVVPQTISVLRKKL HYNEIYLIETVKKKGYKADVNGTFFEKRKLNKNHLFLSITIIISFCLSLVAFEKHILNTKSSDEIKIEELMPNVFQTSDS LPFIFDPTVLRSNTTYYINRQPNNLNISACRQIGTHCDLTYNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIR FNYAARIGVKSENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEKPFLECNEGDCASYVGSISDP KKAVAYKNLFQYPTTGLNILLFPIDDDVSLFYNTESGLSYLVYQYS
Sequences:
>Translated_366_residues MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFSKDEIFTHVWEGTASNIGVVPQTISVLRKKL HYNEIYLIETVKKKGYKADVNGTFFEKRKLNKNHLFLSITIIISFCLSLVAFEKHILNTKSSDEIKIEELMPNVFQTSDS LPFIFDPTVLRSNTTYYINRQPNNLNISACRQIGTHCDLTYNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIR FNYAARIGVKSENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEKPFLECNEGDCASYVGSISDP KKAVAYKNLFQYPTTGLNILLFPIDDDVSLFYNTESGLSYLVYQYS >Mature_366_residues MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFSKDEIFTHVWEGTASNIGVVPQTISVLRKKL HYNEIYLIETVKKKGYKADVNGTFFEKRKLNKNHLFLSITIIISFCLSLVAFEKHILNTKSSDEIKIEELMPNVFQTSDS LPFIFDPTVLRSNTTYYINRQPNNLNISACRQIGTHCDLTYNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIR FNYAARIGVKSENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEKPFLECNEGDCASYVGSISDP KKAVAYKNLFQYPTTGLNILLFPIDDDVSLFYNTESGLSYLVYQYS
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42141; Mature: 42141
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFSKDEIFTHVWE CCCCCEEEEEEEEECCCCCCEECCCCEEEEECCHHHEEEEEECCCCCCCCCHHHHHHHHC GTASNIGVVPQTISVLRKKLHYNEIYLIETVKKKGYKADVNGTFFEKRKLNKNHLFLSIT CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCCEEHHHCCCCCEEEEEHH IIISFCLSLVAFEKHILNTKSSDEIKIEELMPNVFQTSDSLPFIFDPTVLRSNTTYYINR HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCHHHHCCCCCCEEECCEEEECCCEEEEEC QPNNLNISACRQIGTHCDLTYNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIR CCCCCCHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE FNYAARIGVKSENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEK EEEEEEEEEECCCCCEEECEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC PFLECNEGDCASYVGSISDPKKAVAYKNLFQYPTTGLNILLFPIDDDVSLFYNTESGLSY CCEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEE LVYQYS EEEEEC >Mature Secondary Structure MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFSKDEIFTHVWE CCCCCEEEEEEEEECCCCCCEECCCCEEEEECCHHHEEEEEECCCCCCCCCHHHHHHHHC GTASNIGVVPQTISVLRKKLHYNEIYLIETVKKKGYKADVNGTFFEKRKLNKNHLFLSIT CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCCEEHHHCCCCCEEEEEHH IIISFCLSLVAFEKHILNTKSSDEIKIEELMPNVFQTSDSLPFIFDPTVLRSNTTYYINR HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCHHHHCCCCCCEEECCEEEECCCEEEEEC QPNNLNISACRQIGTHCDLTYNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIR CCCCCCHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE FNYAARIGVKSENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEK EEEEEEEEEECCCCCEEECEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCC PFLECNEGDCASYVGSISDPKKAVAYKNLFQYPTTGLNILLFPIDDDVSLFYNTESGLSY CCEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEE LVYQYS EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA