| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is phoB [C]
Identifier: 59713430
GI number: 59713430
Start: 273794
End: 274957
Strand: Reverse
Name: phoB [C]
Synonym: VF_A0247
Alternate gene names: 59713430
Gene position: 274957-273794 (Counterclockwise)
Preceding gene: 59713431
Following gene: 172087797
Centisome position: 20.67
GC content: 30.67
Gene sequence:
>1164_bases ATGCTTAAACGAATAAAAATTGAGCACCGCGATTTCATATTGAACATCGCGGATAACTCGATTTCAAAAAAAAATAATGA AATAAAGTTAACAGAAACCGAATGTAAGATATTAACGTTGCTTTTATTAGCGCCAAAACAAGTATTTAGTAAAGAAGAAA TTCTTAATTATGCTTGGGATCAAGAGCTAAATAACAATACCAGCGTAGTACCCCAAGCCATCTCAATTTTACGCAAAAAA TTATATCGAGATGGCATTGACGCCATAGATACAGTGAAAGGAAAGGGATACAAAGCAACCTCCAATACAAAACCATGCTT TTCAACAAAAAAGAAAAAGCTCGGCTTCACGATGGGAGTAATTGCCACGTCATTTCTGGCATACCATACCTATACATTTG AACCCGATCTTCAACCTAAGATTAATCAATCCTTAATCAAAGTAAGCGACAATATCTATCAAACATCAAACTCAAAACCT GTTGTAATAAATCCAGAAACACTAGACAAAAACATAAGATATTTCATAAACATACAAGATAAAGTATTGAGTTTATCTGC GTGTAAAATGACAAACCAAGAGTGTTCAAGCATATATAATAAAATATTTTTTATTGATGATAGCAATGAAAATATCGATA TAAATAAGCTAATAAGTAATATTGAATTTAAATTTAACAAACCGATAGGTGAACCAATTTTTTATAATTCTAGCAAAGAT GGAAATTATAAAGTATCAAGCAGCATTAATTTAAGAGCTTTAAATAATAGTGCTTATTCTGGGCATGTATTTATTAATTA TGATGTGACTAAATTAAATAATAATCAATACAAGGCGGAGTTATCTGCTTATGTAAAAGAATCGGGATACATTGGTAGCT TTGGCTACTCTGTAAATCTAAACGTAGAAACAGAAAAAGTTAAAAATCAACCTATTACACATTACATTGGCAAAATAAGT CGGGATGAAAAATACAGTGGGATTAAGTCTGGACGTCAACAATTTGGAACCATAAAAGATCAAAATCAGCTCTATGCTTT CCCACTTTTAAAAAATGGCAAGCACTCTACTTATTTTAATCACATATATCCAATGGGAAACGGGGTTAATTATATCTATA TGGAAAATACAAATATCGCATATTTAACTTTTTGCTATAAATAG
Upstream 100 bases:
>100_bases ATAGTGTTCATTTTTGATACAAACTTGACATCGGTATTGACAATCTTATATATAATAACAATTAATACATCGAATATATA AAATACAGTCTATTCACTCT
Downstream 100 bases:
>100_bases TAATAGGCTGTATTTCATAAATACAGCCTATTGAATTACCCTTTATACATTAAAAAATGCCAACTTAGATTTCTGCCCTT CAGATAGCTCAGATAAGTGA
Product: SUA5 protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFSKEEILNYAWDQELNNNTSVVPQAISILRKK LYRDGIDAIDTVKGKGYKATSNTKPCFSTKKKKLGFTMGVIATSFLAYHTYTFEPDLQPKINQSLIKVSDNIYQTSNSKP VVINPETLDKNIRYFINIQDKVLSLSACKMTNQECSSIYNKIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKD GNYKVSSSINLRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNLNVETEKVKNQPITHYIGKIS RDEKYSGIKSGRQQFGTIKDQNQLYAFPLLKNGKHSTYFNHIYPMGNGVNYIYMENTNIAYLTFCYK
Sequences:
>Translated_387_residues MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFSKEEILNYAWDQELNNNTSVVPQAISILRKK LYRDGIDAIDTVKGKGYKATSNTKPCFSTKKKKLGFTMGVIATSFLAYHTYTFEPDLQPKINQSLIKVSDNIYQTSNSKP VVINPETLDKNIRYFINIQDKVLSLSACKMTNQECSSIYNKIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKD GNYKVSSSINLRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNLNVETEKVKNQPITHYIGKIS RDEKYSGIKSGRQQFGTIKDQNQLYAFPLLKNGKHSTYFNHIYPMGNGVNYIYMENTNIAYLTFCYK >Mature_387_residues MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFSKEEILNYAWDQELNNNTSVVPQAISILRKK LYRDGIDAIDTVKGKGYKATSNTKPCFSTKKKKLGFTMGVIATSFLAYHTYTFEPDLQPKINQSLIKVSDNIYQTSNSKP VVINPETLDKNIRYFINIQDKVLSLSACKMTNQECSSIYNKIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKD GNYKVSSSINLRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNLNVETEKVKNQPITHYIGKIS RDEKYSGIKSGRQQFGTIKDQNQLYAFPLLKNGKHSTYFNHIYPMGNGVNYIYMENTNIAYLTFCYK
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44292; Mature: 44292
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFSKEEILNYAWD CCCEEEECCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHCHHHHHHHHHC QELNNNTSVVPQAISILRKKLYRDGIDAIDTVKGKGYKATSNTKPCFSTKKKKLGFTMGV CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCHHHHCCCHHHH IATSFLAYHTYTFEPDLQPKINQSLIKVSDNIYQTSNSKPVVINPETLDKNIRYFINIQD HHHHHHHHEEEEECCCCCCCCCHHHHHHCCCEEECCCCCCEEECCHHCCCCCEEEEEECH KVLSLSACKMTNQECSSIYNKIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKD HEEEEHHHHCCHHHHHHHHHEEEEEECCCCCEEHHHHHHCCEEEECCCCCCCEEECCCCC GNYKVSSSINLRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNL CCEEEECCEEEEEECCCCEECEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEECEEEEE NVETEKVKNQPITHYIGKISRDEKYSGIKSGRQQFGTIKDQNQLYAFPLLKNGKHSTYFN EEEHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEE HIYPMGNGVNYIYMENTNIAYLTFCYK EEEECCCCEEEEEEECCCEEEEEEEEC >Mature Secondary Structure MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFSKEEILNYAWD CCCEEEECCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHCHHHHHHHHHC QELNNNTSVVPQAISILRKKLYRDGIDAIDTVKGKGYKATSNTKPCFSTKKKKLGFTMGV CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCHHHHCCCHHHH IATSFLAYHTYTFEPDLQPKINQSLIKVSDNIYQTSNSKPVVINPETLDKNIRYFINIQD HHHHHHHHEEEEECCCCCCCCCHHHHHHCCCEEECCCCCCEEECCHHCCCCCEEEEEECH KVLSLSACKMTNQECSSIYNKIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKD HEEEEHHHHCCHHHHHHHHHEEEEEECCCCCEEHHHHHHCCEEEECCCCCCCEEECCCCC GNYKVSSSINLRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNL CCEEEECCEEEEEECCCCEECEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEECEEEEE NVETEKVKNQPITHYIGKISRDEKYSGIKSGRQQFGTIKDQNQLYAFPLLKNGKHSTYFN EEEHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEE HIYPMGNGVNYIYMENTNIAYLTFCYK EEEECCCCEEEEEEECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA