| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is 59713417
Identifier: 59713417
GI number: 59713417
Start: 257646
End: 258041
Strand: Reverse
Name: 59713417
Synonym: VF_A0234
Alternate gene names: NA
Gene position: 258041-257646 (Counterclockwise)
Preceding gene: 59713420
Following gene: 59713416
Centisome position: 19.4
GC content: 28.28
Gene sequence:
>396_bases ATGAACATATTAATAGTAAGTAATTACTTTCTTATCAAAGATGTAGCAAATAAAGTACTGAGTGAACTAAATGATGTACA TGATACGAAGACAATGACAGTCACAAATTTTCATAAACTCACAGAAAAAGACATGCATAAGATACCTGTACCTGATCTTG TTGTTTACGATTTAGACAGTGAGAAATACACAATTGAAGATAAAATGGAACTTTTAAGTGAGAAATCGTTTAATCCTTTC ACTGCTGCTCAAAATGTCATTCTAATGGGTTCGTTTGAAAAACTATTAGAAATGAAACAATATAATTTTCCCAAGCAAAC TATATTAGAAAAGCCTTTTTCAATAAAAACGTTAAAAAATACCGTAAAGAAAAATATTACCCTATACCATAATTAA
Upstream 100 bases:
>100_bases AGGCAGAAATTTAAAAGGCCGAGTTAAATATGCTATCAATACAAATCTAAATAGCTATTAGTATGGCGAACTGAAATCCA TCATTTTTTGAGCCATAGTT
Downstream 100 bases:
>100_bases GAAAAGAAAGGACAACTAATGCTTTTGAAAAACAAATTCTTTGTTGCTCTTGCTGGTACCATTATTGCCTATTCCGTCTT CATTTCGTTTACGTCGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNILIVSNYFLIKDVANKVLSELNDVHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDSEKYTIEDKMELLSEKSFNPF TAAQNVILMGSFEKLLEMKQYNFPKQTILEKPFSIKTLKNTVKKNITLYHN
Sequences:
>Translated_131_residues MNILIVSNYFLIKDVANKVLSELNDVHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDSEKYTIEDKMELLSEKSFNPF TAAQNVILMGSFEKLLEMKQYNFPKQTILEKPFSIKTLKNTVKKNITLYHN >Mature_131_residues MNILIVSNYFLIKDVANKVLSELNDVHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDSEKYTIEDKMELLSEKSFNPF TAAQNVILMGSFEKLLEMKQYNFPKQTILEKPFSIKTLKNTVKKNITLYHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15286; Mature: 15286
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIVSNYFLIKDVANKVLSELNDVHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDS CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCC EKYTIEDKMELLSEKSFNPFTAAQNVILMGSFEKLLEMKQYNFPKQTILEKPFSIKTLKN CCEEHHHHHHHHHCCCCCCCHHHCCEEEEECHHHHHHHHHCCCCHHHHHCCCCCHHHHHH TVKKNITLYHN HHHHCEEEECC >Mature Secondary Structure MNILIVSNYFLIKDVANKVLSELNDVHDTKTMTVTNFHKLTEKDMHKIPVPDLVVYDLDS CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECCC EKYTIEDKMELLSEKSFNPFTAAQNVILMGSFEKLLEMKQYNFPKQTILEKPFSIKTLKN CCEEHHHHHHHHHCCCCCCCHHHCCEEEEECHHHHHHHHHCCCCHHHHHCCCCCHHHHHH TVKKNITLYHN HHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA