Click here to switch to the map view.

The map label for this gene is 59713322

Identifier: 59713322

GI number: 59713322

Start: 153410

End: 154444

Strand: Reverse

Name: 59713322

Synonym: VF_A0139

Alternate gene names: NA

Gene position: 154444-153410 (Counterclockwise)

Preceding gene: 59713325

Following gene: 59713321

Centisome position: 11.61

GC content: 41.64

Gene sequence:

>1035_bases
ATGATCTTCATATTAAGCACTCGCAAACGCATCGGATTTTTTCCAAATGAAAAGCACACCAATGAACCAGGTGAAGCTCA
TTATCTAATGCTGCCAGATGAAGCAACCAGCCCTGATTTAAACCAACATCAACTGCCACAAGATGCATGGGTAACTGCAT
TAACCAACCAAGCCACAACGGGACGCCACCCAGATACTCATCCCCTAGCTCAATATAAAACCGGCAATATTCTGTTTTTT
GCTCATGGCTATAACAACACCCAAGATGAAATCGTTTCACGCCATAAACTGCTTGAGAAACAGCTAAAACAACATGGGTA
TACAGGAACAGTGGTGAGTTTTGATTGGCCTTGTGCGAACTACACATTAAATTACTTAGAAGACAGAATGGATGCCTACA
AAAGTGCGATTCAACTGGTGACAGGTGGCATAACCCCATTAGCAATAAATCAACTGCACGAGAAAGAAAACCAATGCGAT
ATTGATATTCATTTACTAGGCCACTCAACAGGGGCTTATGTGATTAGAGAAGCATTTTATCAAGCAAGTAAAAATCGAAT
TTTGCAGCGAATTCACTGGAACGTGAGTCAAATCTGCTTTATTGGTGGAGATATTGCACAGAAGTCATTAACTCAATGTG
ACAATAAATCTGCACCTATGTTTGCTCAATCAAGCCGAATTACTAACTACCAAAGCCCTTATGACAACGCATTAAAAATT
TCTAACATTAAGCGAGCAGGGTTATTCCCTCGTTGTGGACGTGTTGGACTACCTAGCGATGCACCATCAAACCTTGTTAA
CGTGCACTGCGGAGATCACTGGAAACTGCTTACAGAGCCAGAAGAAAACAAAACCATAGGCAATTGGAGCCACTCTTGGC
ACTTTCACTGTAATCACTTTATGGAAGATTTGGCTCACACCTTAAAAGGCGATATAGATAGGCACGCCATTCCCACCCGT
GAATGCGTAAATGGCGAATTGAGACTAACGGTAAAAACACCGGTGACAATCAATAAGAAAAGGCTGAAAGGCTAA

Upstream 100 bases:

>100_bases
TCACTTAGCTCTCATCCGCAACTCAGTATCTTTTCACTTCTCAAATTATTCATTCATCCTATCCTTATTGCTTACGATTA
ATGCATCTCAGGGACATGAA

Downstream 100 bases:

>100_bases
CACCAAAGCATAAGAAAACAAAATCGGTGATTTATCTGCGTAGAGCATTACCACATATAAAAAGCCGCCATTAAATTAAC
TTAACACCACCCCATAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MIFILSTRKRIGFFPNEKHTNEPGEAHYLMLPDEATSPDLNQHQLPQDAWVTALTNQATTGRHPDTHPLAQYKTGNILFF
AHGYNNTQDEIVSRHKLLEKQLKQHGYTGTVVSFDWPCANYTLNYLEDRMDAYKSAIQLVTGGITPLAINQLHEKENQCD
IDIHLLGHSTGAYVIREAFYQASKNRILQRIHWNVSQICFIGGDIAQKSLTQCDNKSAPMFAQSSRITNYQSPYDNALKI
SNIKRAGLFPRCGRVGLPSDAPSNLVNVHCGDHWKLLTEPEENKTIGNWSHSWHFHCNHFMEDLAHTLKGDIDRHAIPTR
ECVNGELRLTVKTPVTINKKRLKG

Sequences:

>Translated_344_residues
MIFILSTRKRIGFFPNEKHTNEPGEAHYLMLPDEATSPDLNQHQLPQDAWVTALTNQATTGRHPDTHPLAQYKTGNILFF
AHGYNNTQDEIVSRHKLLEKQLKQHGYTGTVVSFDWPCANYTLNYLEDRMDAYKSAIQLVTGGITPLAINQLHEKENQCD
IDIHLLGHSTGAYVIREAFYQASKNRILQRIHWNVSQICFIGGDIAQKSLTQCDNKSAPMFAQSSRITNYQSPYDNALKI
SNIKRAGLFPRCGRVGLPSDAPSNLVNVHCGDHWKLLTEPEENKTIGNWSHSWHFHCNHFMEDLAHTLKGDIDRHAIPTR
ECVNGELRLTVKTPVTINKKRLKG
>Mature_344_residues
MIFILSTRKRIGFFPNEKHTNEPGEAHYLMLPDEATSPDLNQHQLPQDAWVTALTNQATTGRHPDTHPLAQYKTGNILFF
AHGYNNTQDEIVSRHKLLEKQLKQHGYTGTVVSFDWPCANYTLNYLEDRMDAYKSAIQLVTGGITPLAINQLHEKENQCD
IDIHLLGHSTGAYVIREAFYQASKNRILQRIHWNVSQICFIGGDIAQKSLTQCDNKSAPMFAQSSRITNYQSPYDNALKI
SNIKRAGLFPRCGRVGLPSDAPSNLVNVHCGDHWKLLTEPEENKTIGNWSHSWHFHCNHFMEDLAHTLKGDIDRHAIPTR
ECVNGELRLTVKTPVTINKKRLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39073; Mature: 39073

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFILSTRKRIGFFPNEKHTNEPGEAHYLMLPDEATSPDLNQHQLPQDAWVTALTNQATT
CEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCCHHHHHHHHCCCCCC
GRHPDTHPLAQYKTGNILFFAHGYNNTQDEIVSRHKLLEKQLKQHGYTGTVVSFDWPCAN
CCCCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
YTLNYLEDRMDAYKSAIQLVTGGITPLAINQLHEKENQCDIDIHLLGHSTGAYVIREAFY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
QASKNRILQRIHWNVSQICFIGGDIAQKSLTQCDNKSAPMFAQSSRITNYQSPYDNALKI
HHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEE
SNIKRAGLFPRCGRVGLPSDAPSNLVNVHCGDHWKLLTEPEENKTIGNWSHSWHFHCNHF
CCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEHHHH
MEDLAHTLKGDIDRHAIPTRECVNGELRLTVKTPVTINKKRLKG
HHHHHHHHHCCCHHCCCCCHHHCCCEEEEEEECCEEECHHHCCC
>Mature Secondary Structure
MIFILSTRKRIGFFPNEKHTNEPGEAHYLMLPDEATSPDLNQHQLPQDAWVTALTNQATT
CEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCCHHHHHHHHCCCCCC
GRHPDTHPLAQYKTGNILFFAHGYNNTQDEIVSRHKLLEKQLKQHGYTGTVVSFDWPCAN
CCCCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
YTLNYLEDRMDAYKSAIQLVTGGITPLAINQLHEKENQCDIDIHLLGHSTGAYVIREAFY
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
QASKNRILQRIHWNVSQICFIGGDIAQKSLTQCDNKSAPMFAQSSRITNYQSPYDNALKI
HHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEE
SNIKRAGLFPRCGRVGLPSDAPSNLVNVHCGDHWKLLTEPEENKTIGNWSHSWHFHCNHF
CCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEHHHH
MEDLAHTLKGDIDRHAIPTRECVNGELRLTVKTPVTINKKRLKG
HHHHHHHHHCCCHHCCCCCHHHCCCEEEEEEECCEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA