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The map label for this gene is 59713226

Identifier: 59713226

GI number: 59713226

Start: 47378

End: 48121

Strand: Reverse

Name: 59713226

Synonym: VF_A0043

Alternate gene names: NA

Gene position: 48121-47378 (Counterclockwise)

Preceding gene: 59713231

Following gene: 59713225

Centisome position: 3.62

GC content: 35.89

Gene sequence:

>744_bases
ATGACAGAGAAAAAGCAGGGAAAAAGAAGTACCGAAACTGCTGAACAAACAAAATGTCAAATCTTAATGGTTGCGGCAAC
GATGTTTGGTGAGTTAGGTTACGAACGTGTATCACTGCGTAATATCAGTGAAAAAGCGGGCGTTTCTCATAGTCTTATTC
GTCACCATTTTGGTAGTAAAGATATGATTTGGAAAGCAATTTGTGATGCTTGTGATAAACATATGCAGACCTATCTACAC
GCTATCATTGCTTCTCTGCCAACAGACAAAACGCCGAGTTATCGTATCTACTTATTCATTGTTAAGTTGTCTGCATTCAC
CTTAATGAACCCACAACCAATCAAAATGATTGCCGATGCCATTCGACAAGATGATAACGCATTACTTGAGTATTTTTTAA
AAACAAAATGTGAATTTGAATCTATATTCAAAGACTTATTTGAAGAATACAACCAAGTAAATCCAGAAAGTAAACTCGAT
ATATGGGAAACAAAATGGCAAATGCTGATCTTTTCTCATGGGGCTTCTAGCTTAACGCCAATGATGTCTGAAACCTGGCC
GCAATTTGCAAATAACCAAGAAAAACTATTATTGCAACATTGGAACTTATTCAATCAAATTATGGCGGCCAAATTTTCTA
TCACAAAAGAGCAAATGCTTTGTCCAACAGAACTTAATGAGTTATTAATAGACGTTCAATGCCCCTTAGAACAAGATATT
ACGTCCTCTGAACTAATTGAATAA

Upstream 100 bases:

>100_bases
CTTAAGCCATCAATACGTCTTAAGCTGCTCAGAAATCACAGTTATTAGCAACTCTTAATTCGTATATATTGGTAATTAAC
GCACAAGCTAAGGGTGAGTA

Downstream 100 bases:

>100_bases
ACAATAAATTAATATATAAAAAAACCATATTCTAAAGGATGGAGAATTCCTATTTATCCATCCTTTAAAACACTCAACAG
AACCATACACAATGTGAGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSHSLIRHHFGSKDMIWKAICDACDKHMQTYLH
AIIASLPTDKTPSYRIYLFIVKLSAFTLMNPQPIKMIADAIRQDDNALLEYFLKTKCEFESIFKDLFEEYNQVNPESKLD
IWETKWQMLIFSHGASSLTPMMSETWPQFANNQEKLLLQHWNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDI
TSSELIE

Sequences:

>Translated_247_residues
MTEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSHSLIRHHFGSKDMIWKAICDACDKHMQTYLH
AIIASLPTDKTPSYRIYLFIVKLSAFTLMNPQPIKMIADAIRQDDNALLEYFLKTKCEFESIFKDLFEEYNQVNPESKLD
IWETKWQMLIFSHGASSLTPMMSETWPQFANNQEKLLLQHWNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDI
TSSELIE
>Mature_246_residues
TEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSHSLIRHHFGSKDMIWKAICDACDKHMQTYLHA
IIASLPTDKTPSYRIYLFIVKLSAFTLMNPQPIKMIADAIRQDDNALLEYFLKTKCEFESIFKDLFEEYNQVNPESKLDI
WETKWQMLIFSHGASSLTPMMSETWPQFANNQEKLLLQHWNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDIT
SSELIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28599; Mature: 28468

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSHSLIRHHFGSK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHCCCH
DMIWKAICDACDKHMQTYLHAIIASLPTDKTPSYRIYLFIVKLSAFTLMNPQPIKMIADA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHCCCCCHHHHHHHH
IRQDDNALLEYFLKTKCEFESIFKDLFEEYNQVNPESKLDIWETKWQMLIFSHGASSLTP
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCHHHH
MMSETWPQFANNQEKLLLQHWNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHEEECCCCCCCCC
TSSELIE
CHHHCCC
>Mature Secondary Structure 
TEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSHSLIRHHFGSK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHCCCH
DMIWKAICDACDKHMQTYLHAIIASLPTDKTPSYRIYLFIVKLSAFTLMNPQPIKMIADA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHCCCCCHHHHHHHH
IRQDDNALLEYFLKTKCEFESIFKDLFEEYNQVNPESKLDIWETKWQMLIFSHGASSLTP
HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCHHHH
MMSETWPQFANNQEKLLLQHWNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHEEECCCCCCCCC
TSSELIE
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA