| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is fixG [H]
Identifier: 59713158
GI number: 59713158
Start: 2871583
End: 2873001
Strand: Direct
Name: fixG [H]
Synonym: VF_2551
Alternate gene names: 59713158
Gene position: 2871583-2873001 (Clockwise)
Preceding gene: 59713157
Following gene: 172087785
Centisome position: 99.1
GC content: 38.76
Gene sequence:
>1419_bases ATGAGTCAGGAAAAAATAGACATCAAGGATGTGACTCCAAAGCAATTTAACCCTAAGACCCATAAATCCAGTAGTGATCG CTTTAATCCAAGCTCTGGAATTTATGTTCGCCAAAGTAAAGGAACCTTCCAGAAATTGCGCCGCTATGGAGCATGGTTTC TGCTTGCCTTATTTATTCTCACACCTTGGATTTCCTTTGGTGACCGCCAAGCTATTTTACTCGATATTGGAAATCAGCAG TTTAGCTTCTTTGGTACGACTCTTTTCCCTCAAGACCTGACTCTTCTCGCGCTTCTTTTTGTGATAGCCGCCTTCGGGTT GTTTTTTATCACCACTTTTTTAGGACGAGTATGGTGTGGTTATTTGTGTCCACAAACCGTTTGGACTTTCATGTACATTT GGTTTGAAGAAAAATTAGAAGGCTCAGCCAACAAACGTCGTAAACAAGATCAAATGAAAAAGACACCAAACTTGTTACTT CGAAAAACACTCAAACACCTCGCATGGATTACTATTGCTATTGCCACTGGCATTACTTTTGTCGGCTATTTTGTTCCTGT AAAAGAACTCGTTGTTGATTTTTTTACTTTCAATAGTGATTTTTTACCTGCATTTTGGGTTCTTTTCTTTGCTGGCTGTA CTTATGGAAACGCAGGTTGGATGCGTTCAATCGTTTGTTTGCATATGTGTCCTTACGCTCGTTTCCAATCAGCCATGTTT GATAAAGACACTTATATTGTTGGTTATGACCCAAAACGAGGAGAAGCTCGTGGTCCTCGATCACGTAAAAAAGATCCAAA AGAATTAGGATTAGGCGACTGTATTGACTGTAATTTATGCGTGCAGGTATGTCCGACAGGCATCGATATCCGTGATGGTC TGCAATACGAATGCATTAACTGTGGCGCTTGTATTGATGCGTGTAACGAAACCATGGATAAGATGAAATATGACAAAAAC CTTATCAGCTATACCACTGAACATAAATTAGCTGGACATAAAACTCATGTTCTGCGTCCAAAGTTAATTGGTTATGGTGT CGTTATGTTGCTGATGATAGGGCTATTTATTACTCAAATAGCAACGGTAGAACCTATGGGGCTAGATGTTTTACGCGATA GAAACCAATTAGCCAGAATCAGCAGTTCGGGTTTAATCGAAAATACTTACACCTTAAAAATCATTAATAAAACCCAACAA ACTCAAGAATACGATCTCAATGTAACAGGCATTGATAATCTCACTTGGTATGGTTCACAACGTGTGAATGTCAAAGCAGG TGAGGTATTAAGCTTACCGATAAGCTTAGGAGCAAGTGAAGCCGAATTAAATAAAACCATCACAACAATTGAATTTGAAA TAACGAATTCTGATGGCCAAGTGATAAAAGCTGAAAGTCGATTCTTTAAAAAGCTATAA
Upstream 100 bases:
>100_bases TCAGGCTATAATTCATCCGCAATGTCATCTAGTTACCAAGTAAAAAATAATGCTCAACACTACTCACTTGGTATCATAAT AATAATATTTAGGAAGAATA
Downstream 100 bases:
>100_bases TCACTTTATTACTGACACAAAAGGCTCGTAATGAGCCTTTTTTATTGAGAATGACTATGTCTGAACACGCTTTTAATTTC AGTACGCTTACCCCTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSQEKIDIKDVTPKQFNPKTHKSSSDRFNPSSGIYVRQSKGTFQKLRRYGAWFLLALFILTPWISFGDRQAILLDIGNQQ FSFFGTTLFPQDLTLLALLFVIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDQMKKTPNLLL RKTLKHLAWITIAIATGITFVGYFVPVKELVVDFFTFNSDFLPAFWVLFFAGCTYGNAGWMRSIVCLHMCPYARFQSAMF DKDTYIVGYDPKRGEARGPRSRKKDPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACNETMDKMKYDKN LISYTTEHKLAGHKTHVLRPKLIGYGVVMLLMIGLFITQIATVEPMGLDVLRDRNQLARISSSGLIENTYTLKIINKTQQ TQEYDLNVTGIDNLTWYGSQRVNVKAGEVLSLPISLGASEAELNKTITTIEFEITNSDGQVIKAESRFFKKL
Sequences:
>Translated_472_residues MSQEKIDIKDVTPKQFNPKTHKSSSDRFNPSSGIYVRQSKGTFQKLRRYGAWFLLALFILTPWISFGDRQAILLDIGNQQ FSFFGTTLFPQDLTLLALLFVIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDQMKKTPNLLL RKTLKHLAWITIAIATGITFVGYFVPVKELVVDFFTFNSDFLPAFWVLFFAGCTYGNAGWMRSIVCLHMCPYARFQSAMF DKDTYIVGYDPKRGEARGPRSRKKDPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACNETMDKMKYDKN LISYTTEHKLAGHKTHVLRPKLIGYGVVMLLMIGLFITQIATVEPMGLDVLRDRNQLARISSSGLIENTYTLKIINKTQQ TQEYDLNVTGIDNLTWYGSQRVNVKAGEVLSLPISLGASEAELNKTITTIEFEITNSDGQVIKAESRFFKKL >Mature_471_residues SQEKIDIKDVTPKQFNPKTHKSSSDRFNPSSGIYVRQSKGTFQKLRRYGAWFLLALFILTPWISFGDRQAILLDIGNQQF SFFGTTLFPQDLTLLALLFVIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDQMKKTPNLLLR KTLKHLAWITIAIATGITFVGYFVPVKELVVDFFTFNSDFLPAFWVLFFAGCTYGNAGWMRSIVCLHMCPYARFQSAMFD KDTYIVGYDPKRGEARGPRSRKKDPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACNETMDKMKYDKNL ISYTTEHKLAGHKTHVLRPKLIGYGVVMLLMIGLFITQIATVEPMGLDVLRDRNQLARISSSGLIENTYTLKIINKTQQT QEYDLNVTGIDNLTWYGSQRVNVKAGEVLSLPISLGASEAELNKTITTIEFEITNSDGQVIKAESRFFKKL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53671; Mature: 53540
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEKIDIKDVTPKQFNPKTHKSSSDRFNPSSGIYVRQSKGTFQKLRRYGAWFLLALFIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH TPWISFGDRQAILLDIGNQQFSFFGTTLFPQDLTLLALLFVIAAFGLFFITTFLGRVWCG HHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGSANKRRKQDQMKKTPNLLLRKTLKHLAWITIAIATGITF HHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH VGYFVPVKELVVDFFTFNSDFLPAFWVLFFAGCTYGNAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHC DKDTYIVGYDPKRGEARGPRSRKKDPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC CGACIDACNETMDKMKYDKNLISYTTEHKLAGHKTHVLRPKLIGYGVVMLLMIGLFITQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVEPMGLDVLRDRNQLARISSSGLIENTYTLKIINKTQQTQEYDLNVTGIDNLTWYGSQ HHCCCCCHHHHHCHHHHHHHCCCCCEECEEEEEEECCCCCCHHCCCEEECCCCEEEECCE RVNVKAGEVLSLPISLGASEAELNKTITTIEFEITNSDGQVIKAESRFFKKL EEEEECCCEEEEEEECCCCHHHHCCEEEEEEEEEECCCCCEEEHHHHHHHCC >Mature Secondary Structure SQEKIDIKDVTPKQFNPKTHKSSSDRFNPSSGIYVRQSKGTFQKLRRYGAWFLLALFIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH TPWISFGDRQAILLDIGNQQFSFFGTTLFPQDLTLLALLFVIAAFGLFFITTFLGRVWCG HHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGSANKRRKQDQMKKTPNLLLRKTLKHLAWITIAIATGITF HHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH VGYFVPVKELVVDFFTFNSDFLPAFWVLFFAGCTYGNAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHC DKDTYIVGYDPKRGEARGPRSRKKDPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN CCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC CGACIDACNETMDKMKYDKNLISYTTEHKLAGHKTHVLRPKLIGYGVVMLLMIGLFITQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVEPMGLDVLRDRNQLARISSSGLIENTYTLKIINKTQQTQEYDLNVTGIDNLTWYGSQ HHCCCCCHHHHHCHHHHHHHCCCCCEECEEEEEEECCCCCCHHCCCEEECCCCEEEECCE RVNVKAGEVLSLPISLGASEAELNKTITTIEFEITNSDGQVIKAESRFFKKL EEEEECCCEEEEEEECCCCHHHHCCEEEEEEEEEECCCCCEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]