| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713113
Identifier: 59713113
GI number: 59713113
Start: 2809663
End: 2810313
Strand: Direct
Name: 59713113
Synonym: VF_2506
Alternate gene names: NA
Gene position: 2809663-2810313 (Clockwise)
Preceding gene: 59713112
Following gene: 59713114
Centisome position: 96.97
GC content: 42.86
Gene sequence:
>651_bases ATGGATGACAAATTAAAGAATAACTTTTGGTACGCAGATTGGTCTTTTCCATTCTTCGTAGGTCTGCTTTCTTCAGGCGT ATTTGCTGGTACTCACATGTATTACCTATATGGCATCGGCGCATTTAACGAAGTTGCTTTCGTTTCAATGTTACGAGCAG GTATGGATACAGGTGTTTATGGTGCGGTTGCTGCCTTTGGTGCGAGTTTCTTATTCGCTCGAATCATTGAAGGTTCACTA GTTGGTATCTTGGACATCGGTGGTGCAATTCAAACCGGTATTGGACTGGGTGTTCCGGCTCTACTTCTTGGTGCTGGTAT TGTTTACCCACTAGAAAACTTTGTTGCCTCATTAATTGTTGGTTTCTTCTTAGGCGTGGCAATTGGTTACATCATCATTA TTGCTCGTAAATATACCGTTGGCCAAAGTAACTCTACCTACGGTGCTGACGTCATGATGGGGGCTGGTAACTCATCAGGT CGCTTCTTAGGTCCTTTGATTGTTCTATCTGCAATTGGTGCTTCAATTCCAATTGGTATCGGTTCATTAATTGGTGCTCT AGCATTTTATCAATGGCAAAAGCCAATCACTGGTGGCGCAATTTTAGGTGCAATGATTTTCGGTTCACTATTCCCAGTAG CCATCGGCTAA
Upstream 100 bases:
>100_bases TGACCTTGAGCTTCTAGAATCTTTCCGACTCACTATCCCTACATGGTTAGAGAGTGTTCATACAAGCATTAGCGGCAAAT AGTAAGTCTGGAGTTTTAAA
Downstream 100 bases:
>100_bases CCCATCTTGGTAATGCTCTTCAACCAAGAAGAGCATTACATAACACAGGTAAGAATTATGTATGACTTACTCATTAAAAA TGGAAAATTAGCTAACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGMDTGVYGAVAAFGASFLFARIIEGSL VGILDIGGAIQTGIGLGVPALLLGAGIVYPLENFVASLIVGFFLGVAIGYIIIIARKYTVGQSNSTYGADVMMGAGNSSG RFLGPLIVLSAIGASIPIGIGSLIGALAFYQWQKPITGGAILGAMIFGSLFPVAIG
Sequences:
>Translated_216_residues MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGMDTGVYGAVAAFGASFLFARIIEGSL VGILDIGGAIQTGIGLGVPALLLGAGIVYPLENFVASLIVGFFLGVAIGYIIIIARKYTVGQSNSTYGADVMMGAGNSSG RFLGPLIVLSAIGASIPIGIGSLIGALAFYQWQKPITGGAILGAMIFGSLFPVAIG >Mature_216_residues MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGMDTGVYGAVAAFGASFLFARIIEGSL VGILDIGGAIQTGIGLGVPALLLGAGIVYPLENFVASLIVGFFLGVAIGYIIIIARKYTVGQSNSTYGADVMMGAGNSSG RFLGPLIVLSAIGASIPIGIGSLIGALAFYQWQKPITGGAILGAMIFGSLFPVAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22394; Mature: 22394
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGMDTGVY CCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCHH GAVAAFGASFLFARIIEGSLVGILDIGGAIQTGIGLGVPALLLGAGIVYPLENFVASLIV HHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHH GFFLGVAIGYIIIIARKYTVGQSNSTYGADVMMGAGNSSGRFLGPLIVLSAIGASIPIGI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCH GSLIGALAFYQWQKPITGGAILGAMIFGSLFPVAIG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVSMLRAGMDTGVY CCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCHH GAVAAFGASFLFARIIEGSLVGILDIGGAIQTGIGLGVPALLLGAGIVYPLENFVASLIV HHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHH GFFLGVAIGYIIIIARKYTVGQSNSTYGADVMMGAGNSSGRFLGPLIVLSAIGASIPIGI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCH GSLIGALAFYQWQKPITGGAILGAMIFGSLFPVAIG HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA