Click here to switch to the map view.

The map label for this gene is 59713114

Identifier: 59713114

GI number: 59713114

Start: 2810371

End: 2811507

Strand: Direct

Name: 59713114

Synonym: VF_2507

Alternate gene names: NA

Gene position: 2810371-2811507 (Clockwise)

Preceding gene: 59713113

Following gene: 59713115

Centisome position: 96.99

GC content: 37.47

Gene sequence:

>1137_bases
ATGTATGACTTACTCATTAAAAATGGAAAATTAGCTAACGGTCACTTTGTCGACATTGCTATTCAAGCGGGAAAAATTGC
CAAAATTAGTACCAATATTATCGAAAGCGCTGAAAAAGAAATCGATTTAAAAGGGCTTCATTACATTAGTGCTGGTTGGA
TAGATTCTCATACTCACTGTTACTCCGCTTCTCCTATATACAACGATGAGCCTGATTTAATTGGTGTTACTCATGGTGTA
ACCACCGTTGTAGATGCAGGTAGTGTCGGTGCTGATGATATTGATGATTTTTATCAACTAACTCAAAAAAGCTCAACTAA
CGTATACAGCATTCTTAATATTTCTCGAATTGGTTTATTACGACAAGATGAGCTTGCTGATATGAGTGATATTGATTTAG
ATATCGCCAAAGAAACCATCAACAAACATTCCGATTTTGTGGTTGGCATTAAAGCGCGAATGAGCGGCAGTGTTGTCAAA
GAAAACGGATTAAAACCTTTGGTTAAAGCCAAAGAGATGCAAGCTCAAAATAACCACCTACCTTTAATGGTACACGTTGG
AAATAATCCACCTAATTTAGATGATATTGCTGAATTACTAACAAAAGGCGACATCATTACACACTGTTATAACGGCAAAC
CAAATCGCATTTTAACTCCAGAAGGTGAGCTAAAAGAATCGATGAAAAAAGCCATTAAACGCGGCGTTATTTTAGATGTT
GGTCATGGCGGTGCAAGTTTCAGTTTTGATGTTGCTGAACAAGCGATTAAAAAGGGAATTTACCCTGACACGATAAGTTC
TGATATCTACTGTAAAAACCGAATTGCAGGACCTGTACGTAGCCTAGCTCATATCATGTCCAAGTTTTTAACCATTGGTT
TATCTCTTGAGCAAGTAATCAACTGTGTAACGATAAATGCTGCAAATGCACTACAAATGGACGCAAAAGGTCAATTAGAA
GTGGGTAAAGACGCCGATCTAACCATTTTCAATATCCATCATGAACCATGTACTTTTGTCGATTCTGAACAAGGAAATCG
TCAAGGTAACGAATCATTTTTACCTTTGGCAAGCATTGTTGCTGGCCAAGTTATCACGACACAACACGGAGAAAAAACTG
ATGTCTTCAATTCATGA

Upstream 100 bases:

>100_bases
TGCAATGATTTTCGGTTCACTATTCCCAGTAGCCATCGGCTAACCCATCTTGGTAATGCTCTTCAACCAAGAAGAGCATT
ACATAACACAGGTAAGAATT

Downstream 100 bases:

>100_bases
GAAGTATGGTCTAACTGAAGTAATTAATGCATCTGGCCGCATGACTGCATTAGGGGTTTCAACGCCAAATGAAGACGTTG
TAAATGCAGTAAAAGAAGGG

Product: dihydroorotase

Products: NA

Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Metallo-Dependent Hydrolase; Aminohydrolase; Protein PhnM; LOW QUALITY PROTEIN Amidohydrolase

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MYDLLIKNGKLANGHFVDIAIQAGKIAKISTNIIESAEKEIDLKGLHYISAGWIDSHTHCYSASPIYNDEPDLIGVTHGV
TTVVDAGSVGADDIDDFYQLTQKSSTNVYSILNISRIGLLRQDELADMSDIDLDIAKETINKHSDFVVGIKARMSGSVVK
ENGLKPLVKAKEMQAQNNHLPLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEGELKESMKKAIKRGVILDV
GHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRIAGPVRSLAHIMSKFLTIGLSLEQVINCVTINAANALQMDAKGQLE
VGKDADLTIFNIHHEPCTFVDSEQGNRQGNESFLPLASIVAGQVITTQHGEKTDVFNS

Sequences:

>Translated_378_residues
MYDLLIKNGKLANGHFVDIAIQAGKIAKISTNIIESAEKEIDLKGLHYISAGWIDSHTHCYSASPIYNDEPDLIGVTHGV
TTVVDAGSVGADDIDDFYQLTQKSSTNVYSILNISRIGLLRQDELADMSDIDLDIAKETINKHSDFVVGIKARMSGSVVK
ENGLKPLVKAKEMQAQNNHLPLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEGELKESMKKAIKRGVILDV
GHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRIAGPVRSLAHIMSKFLTIGLSLEQVINCVTINAANALQMDAKGQLE
VGKDADLTIFNIHHEPCTFVDSEQGNRQGNESFLPLASIVAGQVITTQHGEKTDVFNS
>Mature_378_residues
MYDLLIKNGKLANGHFVDIAIQAGKIAKISTNIIESAEKEIDLKGLHYISAGWIDSHTHCYSASPIYNDEPDLIGVTHGV
TTVVDAGSVGADDIDDFYQLTQKSSTNVYSILNISRIGLLRQDELADMSDIDLDIAKETINKHSDFVVGIKARMSGSVVK
ENGLKPLVKAKEMQAQNNHLPLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEGELKESMKKAIKRGVILDV
GHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRIAGPVRSLAHIMSKFLTIGLSLEQVINCVTINAANALQMDAKGQLE
VGKDADLTIFNIHHEPCTFVDSEQGNRQGNESFLPLASIVAGQVITTQHGEKTDVFNS

Specific function: Unknown

COG id: COG3964

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41088; Mature: 41088

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLLIKNGKLANGHFVDIAIQAGKIAKISTNIIESAEKEIDLKGLHYISAGWIDSHTHC
CCCEEEECCEECCCEEEEEEEECCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCE
YSASPIYNDEPDLIGVTHGVTTVVDAGSVGADDIDDFYQLTQKSSTNVYSILNISRIGLL
EECCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCC
RQDELADMSDIDLDIAKETINKHSDFVVGIKARMSGSVVKENGLKPLVKAKEMQAQNNHL
CCHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHCCCCC
PLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEGELKESMKKAIKRGVILDV
CEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHCCCEEEE
GHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRIAGPVRSLAHIMSKFLTIGLSLEQVI
CCCCCCEEHHHHHHHHHCCCCCCCCCCCCEECHHCCHHHHHHHHHHHHHHHHCCCHHHHH
NCVTINAANALQMDAKGQLEVGKDADLTIFNIHHEPCTFVDSEQGNRQGNESFLPLASIV
CEEEECCCCEEEECCCCCEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHH
AGQVITTQHGEKTDVFNS
HCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MYDLLIKNGKLANGHFVDIAIQAGKIAKISTNIIESAEKEIDLKGLHYISAGWIDSHTHC
CCCEEEECCEECCCEEEEEEEECCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCE
YSASPIYNDEPDLIGVTHGVTTVVDAGSVGADDIDDFYQLTQKSSTNVYSILNISRIGLL
EECCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCC
RQDELADMSDIDLDIAKETINKHSDFVVGIKARMSGSVVKENGLKPLVKAKEMQAQNNHL
CCHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHCCCCC
PLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEGELKESMKKAIKRGVILDV
CEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHCCCEEEE
GHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRIAGPVRSLAHIMSKFLTIGLSLEQVI
CCCCCCEEHHHHHHHHHCCCCCCCCCCCCEECHHCCHHHHHHHHHHHHHHHHCCCHHHHH
NCVTINAANALQMDAKGQLEVGKDADLTIFNIHHEPCTFVDSEQGNRQGNESFLPLASIV
CEEEECCCCEEEECCCCCEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHH
AGQVITTQHGEKTDVFNS
HCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA