| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is hslO [H]
Identifier: 59713084
GI number: 59713084
Start: 2773975
End: 2774850
Strand: Direct
Name: hslO [H]
Synonym: VF_2477
Alternate gene names: 59713084
Gene position: 2773975-2774850 (Clockwise)
Preceding gene: 59713083
Following gene: 59713085
Centisome position: 95.74
GC content: 40.18
Gene sequence:
>876_bases ATGGCAAATAACACATTGCATCGTTACCTATTTGAAGATTTATCTGTTCGTGGTGAATTAGTTCAACTAGATGATGCTTA CCAACAAATCATTTCTAGCAAGGAATACCCAAAACCAGTTCAAAATCTATTGGGTGAGCTATTAGTTGCAACCACACTAT TAACTGCAACATTGAAATTTGAAGGTTCTATTACCCTTCAACTTCAAGGTGACGGCCCAGTTTCTCTTGCAGTAATTAAC GGCGATAACAACCAAAAAGTACGTGGTGTTGCTCGTTTTGAAGGTGATATTGCTGAAGATGCAACGTTGCACCAACTAAT GGGTCGCGGCTACCTAGTTATCACTATCACACCAAAAGATGGTGAGCGTTACCAAGGTGTTGTTGCTCTTGAAGGTGAAA ATCTAGCACAATGTTTTGAAGGTTACTTCGAGCGTTCTGAGCAACTAAAAACTCGTCTATGGTTACGTCTAGGTGAATAT GAAGGTAAACCTCACGCAGCAGGTATGTTACTGCAAGTAATGCCTGATGGTACTGGTTCTGAAAATGACTTTGAACATTT AGAACAACTAACAGACACCATTAAAAATGAAGAGCTGTTTGGTTTACCAGCTGAAGACGTACTTTACCGTCTATATAACC AAGATAAAGTGCAACTGTTTGAACCTCAAGACGTTGAGTTCTTCTGTGGTTGTTCACGTGAACGCAGCGGTGGTGCAATC GTAACGATTGATCGTGCTGAAGTTGATGACATCATTAAAACAGAAGGGAAAATTTCTCTTCACTGTGACTACTGTGGCAC AAGCTACGATTTCGACAGTATTGATGTTGCAAACCTATTTGAACAAGCAACAAGCGGCAACGATACAGTACATTAA
Upstream 100 bases:
>100_bases ACCAATAAATACGCTTTTCTGTCTCATACCTTATTTATACTGGTTGTCTCCGCTATACTATGAGTAACGACAACCCTTAA TACAATTGCTGGAGTATTTC
Downstream 100 bases:
>100_bases TTTACTGCATAGAATAAGTTGCAAAACTGTTACAAAAGCCAGCCATTAGGTTGGCTTTTTTTATAACTAAATTTGATATA AACCACACTTTTAATTCCAC
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MANNTLHRYLFEDLSVRGELVQLDDAYQQIISSKEYPKPVQNLLGELLVATTLLTATLKFEGSITLQLQGDGPVSLAVIN GDNNQKVRGVARFEGDIAEDATLHQLMGRGYLVITITPKDGERYQGVVALEGENLAQCFEGYFERSEQLKTRLWLRLGEY EGKPHAAGMLLQVMPDGTGSENDFEHLEQLTDTIKNEELFGLPAEDVLYRLYNQDKVQLFEPQDVEFFCGCSRERSGGAI VTIDRAEVDDIIKTEGKISLHCDYCGTSYDFDSIDVANLFEQATSGNDTVH
Sequences:
>Translated_291_residues MANNTLHRYLFEDLSVRGELVQLDDAYQQIISSKEYPKPVQNLLGELLVATTLLTATLKFEGSITLQLQGDGPVSLAVIN GDNNQKVRGVARFEGDIAEDATLHQLMGRGYLVITITPKDGERYQGVVALEGENLAQCFEGYFERSEQLKTRLWLRLGEY EGKPHAAGMLLQVMPDGTGSENDFEHLEQLTDTIKNEELFGLPAEDVLYRLYNQDKVQLFEPQDVEFFCGCSRERSGGAI VTIDRAEVDDIIKTEGKISLHCDYCGTSYDFDSIDVANLFEQATSGNDTVH >Mature_290_residues ANNTLHRYLFEDLSVRGELVQLDDAYQQIISSKEYPKPVQNLLGELLVATTLLTATLKFEGSITLQLQGDGPVSLAVING DNNQKVRGVARFEGDIAEDATLHQLMGRGYLVITITPKDGERYQGVVALEGENLAQCFEGYFERSEQLKTRLWLRLGEYE GKPHAAGMLLQVMPDGTGSENDFEHLEQLTDTIKNEELFGLPAEDVLYRLYNQDKVQLFEPQDVEFFCGCSRERSGGAIV TIDRAEVDDIIKTEGKISLHCDYCGTSYDFDSIDVANLFEQATSGNDTVH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=289, Percent_Identity=58.1314878892734, Blast_Score=363, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 32484; Mature: 32353
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNTLHRYLFEDLSVRGELVQLDDAYQQIISSKEYPKPVQNLLGELLVATTLLTATLKF CCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEE EGSITLQLQGDGPVSLAVINGDNNQKVRGVARFEGDIAEDATLHQLMGRGYLVITITPKD CCEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCC GERYQGVVALEGENLAQCFEGYFERSEQLKTRLWLRLGEYEGKPHAAGMLLQVMPDGTGS CCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC ENDFEHLEQLTDTIKNEELFGLPAEDVLYRLYNQDKVQLFEPQDVEFFCGCSRERSGGAI CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCEE VTIDRAEVDDIIKTEGKISLHCDYCGTSYDFDSIDVANLFEQATSGNDTVH EEEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure ANNTLHRYLFEDLSVRGELVQLDDAYQQIISSKEYPKPVQNLLGELLVATTLLTATLKF CCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEE EGSITLQLQGDGPVSLAVINGDNNQKVRGVARFEGDIAEDATLHQLMGRGYLVITITPKD CCEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCC GERYQGVVALEGENLAQCFEGYFERSEQLKTRLWLRLGEYEGKPHAAGMLLQVMPDGTGS CCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC ENDFEHLEQLTDTIKNEELFGLPAEDVLYRLYNQDKVQLFEPQDVEFFCGCSRERSGGAI CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCEE VTIDRAEVDDIIKTEGKISLHCDYCGTSYDFDSIDVANLFEQATSGNDTVH EEEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA