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The map label for this gene is hslR [H]

Identifier: 59713083

GI number: 59713083

Start: 2773481

End: 2773882

Strand: Direct

Name: hslR [H]

Synonym: VF_2476

Alternate gene names: 59713083

Gene position: 2773481-2773882 (Clockwise)

Preceding gene: 59713067

Following gene: 59713084

Centisome position: 95.72

GC content: 42.79

Gene sequence:

>402_bases
ATGAGTTCAAAATCAAACACCACTGAGGGTGTAAGACTCGATAAATGGCTCTGGGCAGCTCGTTTTTATAAAACACGCTC
AATTGCTCGCAACATGGTTGATGGAGGTAAAGTTCAATATAATGGACAACGCTCAAAACCAAGTAAGATTGTGGAAGTAG
GCGCCGAAATAAAGCTGCGCCAAGGAAACAATGAAGAGATCACTGTGATCATCGAGATCGTTTCCGATCAACGCCGCGGA
GCCCCTATTGCACAAACTCTTTACAAAGAAACACAAGACAGTATTAAGCACCGTGAAGAAAATGCGCAATTACGCAAACT
CAATTCACTTGGTAGCCCACGACCAGATAAGCGTCCAGATAAAAAACAACGACGCGATATCATGAAGTTTAAGCACCAAT
AA

Upstream 100 bases:

>100_bases
CTCTAATTAGATACGATTTTTGATTAATTCCCCTCAAAAGATTGAAAAAAATATTCCAGGCACCATTTAAGAAGCAGAGA
TATGACATTAGGTAGACATC

Downstream 100 bases:

>100_bases
ATACGCTTTTCTGTCTCATACCTTATTTATACTGGTTGTCTCCGCTATACTATGAGTAACGACAACCCTTAATACAATTG
CTGGAGTATTTCATGGCAAA

Product: ribosome-associated heat shock protein Hsp15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSSKSNTTEGVRLDKWLWAARFYKTRSIARNMVDGGKVQYNGQRSKPSKIVEVGAEIKLRQGNNEEITVIIEIVSDQRRG
APIAQTLYKETQDSIKHREENAQLRKLNSLGSPRPDKRPDKKQRRDIMKFKHQ

Sequences:

>Translated_133_residues
MSSKSNTTEGVRLDKWLWAARFYKTRSIARNMVDGGKVQYNGQRSKPSKIVEVGAEIKLRQGNNEEITVIIEIVSDQRRG
APIAQTLYKETQDSIKHREENAQLRKLNSLGSPRPDKRPDKKQRRDIMKFKHQ
>Mature_132_residues
SSKSNTTEGVRLDKWLWAARFYKTRSIARNMVDGGKVQYNGQRSKPSKIVEVGAEIKLRQGNNEEITVIIEIVSDQRRGA
PIAQTLYKETQDSIKHREENAQLRKLNSLGSPRPDKRPDKKQRRDIMKFKHQ

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=122, Percent_Identity=63.9344262295082, Blast_Score=169, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15406; Mature: 15275

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKSNTTEGVRLDKWLWAARFYKTRSIARNMVDGGKVQYNGQRSKPSKIVEVGAEIKLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCEEEEE
QGNNEEITVIIEIVSDQRRGAPIAQTLYKETQDSIKHREENAQLRKLNSLGSPRPDKRPD
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKQRRDIMKFKHQ
HHHHHHHHHHCCC
>Mature Secondary Structure 
SSKSNTTEGVRLDKWLWAARFYKTRSIARNMVDGGKVQYNGQRSKPSKIVEVGAEIKLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCEEEEE
QGNNEEITVIIEIVSDQRRGAPIAQTLYKETQDSIKHREENAQLRKLNSLGSPRPDKRPD
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKQRRDIMKFKHQ
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]