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The map label for this gene is gspN [H]

Identifier: 59713071

GI number: 59713071

Start: 2761841

End: 2762602

Strand: Reverse

Name: gspN [H]

Synonym: VF_2464

Alternate gene names: 59713071

Gene position: 2762602-2761841 (Counterclockwise)

Preceding gene: 59713072

Following gene: 172087780

Centisome position: 95.34

GC content: 40.03

Gene sequence:

>762_bases
ATGAAGTTTAAGTTATTAATCGCGACCGTATTTTCTACTTTTTTTACCTTTAGTGCATTATTGCACATCCCAATTCAGTG
GGTTGTGGATCAAGCGCCTAAAGTAAGAGGATTAGAGTTAACTGGGCTTTCAGGGACACCATGGAAAGGACAAGTTGATT
CATTATCCTTTCAACGAATGAACTATGGCCAAGTTCAATGGGAAATTGATCCACTTGCCATTTTTAAAGGTCATGCTGTT
TTTGCGGTGCGTTTTGGTCGTGGTAGTGAATTAGATTTACGTGGAAAAGGCACGGTTGGTTATAGTGTTTCAATGGGGGC
TTATGCTGAGAACTTGGTGCTTTCTTTTCCGATTGCAAATGCAATGAAACATTTGCCTATGGCGGTTCCTATCTCATTAC
AAGGCCAAGCAGAGATCAGCGTGAAATCTTATCAACAGGGTCAACCTTGGTGTAAACAAGCAACTGGTGAAGTCGTTTGG
TCTGGTGGTAAAGTCGTTTCACCATTAGGTAATATTGACCCTGAAACCGTCATTGCTGATGTGATTTGTAGTGACAATAA
AATCAGTCTTGTTAGTAAGCAATCATCAAAAGATGTTGCGAGCCAATTTGATGTTACCCTTAATCCAAATCGCTCTTATC
AAGTAAGTGGTTGGTTTAAACCTGAAGCTAATTTCCCTTCAAGTTTAAGAAGTCAGTTGAAATGGGTAGGCAAGCCTGAT
TCAAAAGGGCAATATAGAGTGACATACTCAGGACGTCTATAA

Upstream 100 bases:

>100_bases
GTGATTCTCAGGGCATTAATGTTCAATTTTTAGATTTAAATAAAACTGATGTGGAAGGTGTGGTTGAAGTGAACCGTCTT
CAATTAACTCGAGAGGCATC

Downstream 100 bases:

>100_bases
AGGAAAAACGATGGCTAAAAAACAGTTGCCAACGATTTTGGATACACGCGTTGAAGCCAAATCCAACCTATTCTGCATTG
AATCGGTTGATTTGCGCTTT

Product: general secretion pathway protein N

Products: NA

Alternate protein names: Cholera toxin secretion protein epsN [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKFKLLIATVFSTFFTFSALLHIPIQWVVDQAPKVRGLELTGLSGTPWKGQVDSLSFQRMNYGQVQWEIDPLAIFKGHAV
FAVRFGRGSELDLRGKGTVGYSVSMGAYAENLVLSFPIANAMKHLPMAVPISLQGQAEISVKSYQQGQPWCKQATGEVVW
SGGKVVSPLGNIDPETVIADVICSDNKISLVSKQSSKDVASQFDVTLNPNRSYQVSGWFKPEANFPSSLRSQLKWVGKPD
SKGQYRVTYSGRL

Sequences:

>Translated_253_residues
MKFKLLIATVFSTFFTFSALLHIPIQWVVDQAPKVRGLELTGLSGTPWKGQVDSLSFQRMNYGQVQWEIDPLAIFKGHAV
FAVRFGRGSELDLRGKGTVGYSVSMGAYAENLVLSFPIANAMKHLPMAVPISLQGQAEISVKSYQQGQPWCKQATGEVVW
SGGKVVSPLGNIDPETVIADVICSDNKISLVSKQSSKDVASQFDVTLNPNRSYQVSGWFKPEANFPSSLRSQLKWVGKPD
SKGQYRVTYSGRL
>Mature_253_residues
MKFKLLIATVFSTFFTFSALLHIPIQWVVDQAPKVRGLELTGLSGTPWKGQVDSLSFQRMNYGQVQWEIDPLAIFKGHAV
FAVRFGRGSELDLRGKGTVGYSVSMGAYAENLVLSFPIANAMKHLPMAVPISLQGQAEISVKSYQQGQPWCKQATGEVVW
SGGKVVSPLGNIDPETVIADVICSDNKISLVSKQSSKDVASQFDVTLNPNRSYQVSGWFKPEANFPSSLRSQLKWVGKPD
SKGQYRVTYSGRL

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP N family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022792
- InterPro:   IPR000645 [H]

Pfam domain/function: PF01203 GSPII_N [H]

EC number: NA

Molecular weight: Translated: 27837; Mature: 27837

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKLLIATVFSTFFTFSALLHIPIQWVVDQAPKVRGLELTGLSGTPWKGQVDSLSFQRM
CCEEEHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEC
NYGQVQWEIDPLAIFKGHAVFAVRFGRGSELDLRGKGTVGYSVSMGAYAENLVLSFPIAN
CCCEEEEEECEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCEEEECCHHH
AMKHLPMAVPISLQGQAEISVKSYQQGQPWCKQATGEVVWSGGKVVSPLGNIDPETVIAD
HHHHCCEEEEEEECCCEEEEEECCCCCCCHHHCCCCCEEECCCEEECCCCCCCHHHEEEE
VICSDNKISLVSKQSSKDVASQFDVTLNPNRSYQVSGWFKPEANFPSSLRSQLKWVGKPD
EEECCCEEEEEECCCCHHHHHHCCEEECCCCCEEEEEEECCCCCCCHHHHHHHEECCCCC
SKGQYRVTYSGRL
CCCCEEEEECCCC
>Mature Secondary Structure
MKFKLLIATVFSTFFTFSALLHIPIQWVVDQAPKVRGLELTGLSGTPWKGQVDSLSFQRM
CCEEEHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEC
NYGQVQWEIDPLAIFKGHAVFAVRFGRGSELDLRGKGTVGYSVSMGAYAENLVLSFPIAN
CCCEEEEEECEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCEEEECCHHH
AMKHLPMAVPISLQGQAEISVKSYQQGQPWCKQATGEVVWSGGKVVSPLGNIDPETVIAD
HHHHCCEEEEEEECCCEEEEEECCCCCCCHHHCCCCCEEECCCEEECCCCCCCHHHEEEE
VICSDNKISLVSKQSSKDVASQFDVTLNPNRSYQVSGWFKPEANFPSSLRSQLKWVGKPD
EEECCCEEEEEECCCCHHHHHHCCEEECCCCCEEEEEEECCCCCCCHHHHHHHEECCCCC
SKGQYRVTYSGRL
CCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]