Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is yecH [H]

Identifier: 59713064

GI number: 59713064

Start: 2755505

End: 2755747

Strand: Reverse

Name: yecH [H]

Synonym: VF_2457

Alternate gene names: 59713064

Gene position: 2755747-2755505 (Counterclockwise)

Preceding gene: 59713065

Following gene: 59713060

Centisome position: 95.11

GC content: 37.86

Gene sequence:

>243_bases
ATGAAACAAGATATTCATGGTCATGTTGTTTTAAATATTCTTATTGATTCTAAAGAGCCGCTACCACGCGCTCAATTGGA
AGAGAAAATAGAGAGTGAATTTGGTTCTGAGGTTTGTTTTCATACTTGTAGCCAACAAGATTTAACGCTAGCTGAGTTGC
TTGATTTTTTGCTATCTAAAAAGAAGATTGTCGCAACGGAAGAAGGGCTTACAGCAAACCCTGAGCGCATGTGTCACCAT
TAA

Upstream 100 bases:

>100_bases
GCTTTCTATGAGCTATTTGTCGATAAAAATAGAAAGCGTAAAGCTTACTGTTTTTATCTGGTATGCTAAAACGGTCTTTA
ATAAATGATGAGAAAGTGAA

Downstream 100 bases:

>100_bases
TTATATTGGTATAAATAAAAAGGTCGCATATAGCGACCTTTTTATTTGAAAGTGATGGTTTAGATTAAATATGGCTGAAG
TAGCTCATGATACCATCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKQDIHGHVVLNILIDSKEPLPRAQLEEKIESEFGSEVCFHTCSQQDLTLAELLDFLLSKKKIVATEEGLTANPERMCHH

Sequences:

>Translated_80_residues
MKQDIHGHVVLNILIDSKEPLPRAQLEEKIESEFGSEVCFHTCSQQDLTLAELLDFLLSKKKIVATEEGLTANPERMCHH
>Mature_80_residues
MKQDIHGHVVLNILIDSKEPLPRAQLEEKIESEFGSEVCFHTCSQQDLTLAELLDFLLSKKKIVATEEGLTANPERMCHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788217, Length=77, Percent_Identity=40.2597402597403, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019620 [H]

Pfam domain/function: PF10678 DUF2492 [H]

EC number: NA

Molecular weight: Translated: 9085; Mature: 9085

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDIHGHVVLNILIDSKEPLPRAQLEEKIESEFGSEVCFHTCSQQDLTLAELLDFLLSK
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHCC
KKIVATEEGLTANPERMCHH
CCCEECCCCCCCCHHHHCCC
>Mature Secondary Structure
MKQDIHGHVVLNILIDSKEPLPRAQLEEKIESEFGSEVCFHTCSQQDLTLAELLDFLLSK
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHCC
KKIVATEEGLTANPERMCHH
CCCEECCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]