| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713065
Identifier: 59713065
GI number: 59713065
Start: 2756572
End: 2756937
Strand: Reverse
Name: 59713065
Synonym: VF_2458
Alternate gene names: NA
Gene position: 2756937-2756572 (Counterclockwise)
Preceding gene: 59713068
Following gene: 59713064
Centisome position: 95.15
GC content: 35.52
Gene sequence:
>366_bases ATGTCTGATATTGATCTTGTTGTGAAGCAAAGTCGTAAAATTGAATCTTTATTAAAGACACATTATCACGCAGAAGGAAA AGGACTTCATCAGCTTATTAGTAGTTGTGAGGAGCGTCTTCCTCATGAAGTGATTAAGAAATTACGCTTTATTGCAACTA TGCGAAACAAAGTCGTGCACGAAGAAGGGTATAAGTTAGAAGATAAATCCGCTTTCAAAGCTACGTGTAAAGAAATGAAT GATATCTTGACCCCAAGAGCCAGTCGATTTTTATGGAAATTGGTGGGGGGGATCGTATTGATTGCTACCTTGATATCTTT AGCTATCTATATGATTCATTGGGAAAATATTAAGCATTTATTTTGA
Upstream 100 bases:
>100_bases GTGTACTAAAGATAATAATCTGAAGGATCAGAAAGAGAAACTCGCATTTGCATGGTATAAAGTAGAAAGAGATTTCAGAG TCAAAGATTAGGAGAGTGAT
Downstream 100 bases:
>100_bases AAACTATATTTTAAGCATAAAAAAACGGACGCATTTGCGTCCGTTTTTTTATATGAACTTATTTGAATGTAGATTAGTAC ATCATTGGCAGAGTCATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSDIDLVVKQSRKIESLLKTHYHAEGKGLHQLISSCEERLPHEVIKKLRFIATMRNKVVHEEGYKLEDKSAFKATCKEMN DILTPRASRFLWKLVGGIVLIATLISLAIYMIHWENIKHLF
Sequences:
>Translated_121_residues MSDIDLVVKQSRKIESLLKTHYHAEGKGLHQLISSCEERLPHEVIKKLRFIATMRNKVVHEEGYKLEDKSAFKATCKEMN DILTPRASRFLWKLVGGIVLIATLISLAIYMIHWENIKHLF >Mature_120_residues SDIDLVVKQSRKIESLLKTHYHAEGKGLHQLISSCEERLPHEVIKKLRFIATMRNKVVHEEGYKLEDKSAFKATCKEMND ILTPRASRFLWKLVGGIVLIATLISLAIYMIHWENIKHLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14042; Mature: 13911
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIDLVVKQSRKIESLLKTHYHAEGKGLHQLISSCEERLPHEVIKKLRFIATMRNKVVH CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH EEGYKLEDKSAFKATCKEMNDILTPRASRFLWKLVGGIVLIATLISLAIYMIHWENIKHL HCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC F C >Mature Secondary Structure SDIDLVVKQSRKIESLLKTHYHAEGKGLHQLISSCEERLPHEVIKKLRFIATMRNKVVH CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH EEGYKLEDKSAFKATCKEMNDILTPRASRFLWKLVGGIVLIATLISLAIYMIHWENIKHL HCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA