Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is yijD [H]

Identifier: 59713044

GI number: 59713044

Start: 2737605

End: 2737979

Strand: Reverse

Name: yijD [H]

Synonym: VF_2437

Alternate gene names: 59713044

Gene position: 2737979-2737605 (Counterclockwise)

Preceding gene: 172087777

Following gene: 59713042

Centisome position: 94.49

GC content: 37.07

Gene sequence:

>375_bases
ATGACACATGAAAATAGTAGAAATGAACGAAAGACATTAGTGCTATCAGTGGTGGCAGGTCTTTGTTTAAATGCCGTTTG
GGTTGGATTAACAGTAACTGAAGTTGCTTTCTCAATTTTTCCGATTATTGCATTGGTTCTAGCGGCTCAAGGTTTATATC
AAGAATACTTACGACCGCCAGTGAGTGAAGATACTCCGCTTATTGCAGTGGCTTGTTTTTTTGTAGGATTGTTTGGTCAT
TCAGCATTAGCAAAAGCACAATATCCAGAAGCGGGTTCTAATTTCTTTTCGATTCTAGTTGCTCTGGCTTTGTTACTTTG
GATTGGTGTAAAAATGGGTATTTTGAAAAAGAAAGATACTCACACAGAAATATAA

Upstream 100 bases:

>100_bases
GAATGCTCTCTAAAGGGGCCTACTGGTACCGTAAAGAGAATGAAAAATAGAATTTAGGTACATTGTTCGCAGTGAATCAA
TGTCTGTATGAGGTAAAAAC

Downstream 100 bases:

>100_bases
ATAACCGTTCATAAAAAAGGCTCAGAACATTACGCTCTGAGCCTTTTTTTTAAGTTTATTTTCTTTCTAAGAAAACGCCT
GCTTCCATATGGTGTGTGTA

Product: hypothetical protein

Products: AMP; diphosphate; acetyl-CoA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTHENSRNERKTLVLSVVAGLCLNAVWVGLTVTEVAFSIFPIIALVLAAQGLYQEYLRPPVSEDTPLIAVACFFVGLFGH
SALAKAQYPEAGSNFFSILVALALLLWIGVKMGILKKKDTHTEI

Sequences:

>Translated_124_residues
MTHENSRNERKTLVLSVVAGLCLNAVWVGLTVTEVAFSIFPIIALVLAAQGLYQEYLRPPVSEDTPLIAVACFFVGLFGH
SALAKAQYPEAGSNFFSILVALALLLWIGVKMGILKKKDTHTEI
>Mature_123_residues
THENSRNERKTLVLSVVAGLCLNAVWVGLTVTEVAFSIFPIIALVLAAQGLYQEYLRPPVSEDTPLIAVACFFVGLFGHS
ALAKAQYPEAGSNFFSILVALALLLWIGVKMGILKKKDTHTEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=115, Percent_Identity=39.1304347826087, Blast_Score=93, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: 6.2.1.1

Molecular weight: Translated: 13488; Mature: 13357

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHENSRNERKTLVLSVVAGLCLNAVWVGLTVTEVAFSIFPIIALVLAAQGLYQEYLRPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSEDTPLIAVACFFVGLFGHSALAKAQYPEAGSNFFSILVALALLLWIGVKMGILKKKDT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HTEI
CCCC
>Mature Secondary Structure 
THENSRNERKTLVLSVVAGLCLNAVWVGLTVTEVAFSIFPIIALVLAAQGLYQEYLRPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSEDTPLIAVACFFVGLFGHSALAKAQYPEAGSNFFSILVALALLLWIGVKMGILKKKDT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HTEI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; acetate; CoA

Specific reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]