| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ppc [H]
Identifier: 59712915
GI number: 59712915
Start: 2593421
End: 2596051
Strand: Direct
Name: ppc [H]
Synonym: VF_2308
Alternate gene names: 59712915
Gene position: 2593421-2596051 (Clockwise)
Preceding gene: 59712914
Following gene: 59712923
Centisome position: 89.5
GC content: 43.41
Gene sequence:
>2631_bases ATGAATGAAAAGTACGCTGCTTTAAAAAGCAATGTCAGCATGTTGGGTCACCTGCTTGGTAACACGATTCGAGACGCACA TGGTGAAGAGCTATTAGCAAAAGTTGAAACCATTCGTAAGCTGTCTAAAACAGCGCGCGCAGGAAGCGACGAAGACCGCA ATGCACTGATTGAAGAAATTAAAAGCCTTCCAGACGATCAACTAACACCTGTTGCTCGAGCATTCAGCCAATTTCTAAAC CTTACCAATATGGCAGAACAATATCATACTATCTCACGCCATTGTGAAGCACATGTATGTGAACCTGATGCTATTAGTAC CTTATTCTCAAAACTAAGCCAAAGTAACGTAAGTAAGCTAGATACTGCACAAGCCGTTCGTGAATTAAATATCGAATTGG TTCTTACTGCACACCCTACTGAAATCGCACGTCGCACCATGATCAACAAGTTGGTTAAAATCAACGAATGTTTATCAAAA CTTGAGCTTGGTGATATCTCTTTTTCAGAACGAGATAAAACAGAACGTCGTCTAGAGCAACTGATTGCTCAAGCATGGCA CTCAGATGTTATTCGTCAAGAACGTCCAACACCATTAGATGAAGCTAAATGGGGCTTTGCTGTTGTTGAAAACTCTCTAT GGCAAGGTATTCCAGAGTTTTTACGTGAATTCGACCAACGCCTAGAAGGCCACTTAGGTGAAGGACTTCCAATCGATGCG CGTCCAGTCCACATGTCATCTTGGATGGGTGGAGACCGTGATGGTAACCCATTTGTAACGCACAAAATTACTCGTGAAGT GATGCTCCTTTCTCGTTGGAAAGCAGCCGATCTTTACTTAAAAGACATTAATGAGCTAATCAGCGAACTTTCAATGGTCA AATGTACTGATGAAGTTCGTGAGTTGGCGGGCGACCAACACGAACCTTATCGAGCTATTCTAAAACAGCTTCGTACATTG TTAGGCGATACTCTGGAAAGCCTAGATGCGCAAATGAAAGGTGAGCTAGCACCAAACAAAGTAATCCTGACCGATGCAGA TCAGCTTTGGAACCCGCTGTATGCATGTTACCAATCACTGCATGCTTGTGGTATGGGGATCATTGCTGATGGTTCATTAC TCGATACATTACGTCGAGTAAAAGCATTTGGTGCTCACTTAGTTCGTTTGGATATCCGCCAAGAAAGTACCCGTCACTCG GATGTATTGTCTGAACTGACTCGTTACTTAGGCATTGGTGATTATGACCAATGGAGCGAACAAGATAAAATTTCATTCCT TGTTAATGAGCTAAGCTCAAAACGTCCTCTTCTTCCACGCAAATGGGAACCGTCTCCAGAAGTTCAAGAAGTTATTGATA CTTGTAAAGTAGTTGCAGAACAATCTAAAGAAGCATTAGGCTCTTATGTCATTTCAATGGCTCGTACTGCATCAGACGTA CTGGCTGTTCATCTGTTACTTCAAGAAGCTGGTTGTCCATTCCGTATGGATGTATGTCCATTATTCGAAACTTTAGACGA TTTAAATCGCTCTAAAGAAGTAATGGAACAACTATTCTCTATTGATTGGTATCGTGGATTTATCCAAAACCATCAAATGG TAATGATCGGTTATTCAGATTCAGCTAAAGATGCAGGTGTAATGTCTGCTGGTTGGGCTCAGTACAGTGCAATGGAAGCG CTTGTTGAAGTCTGTGAGAAAGAAAGCATCGAACTGACACTTTTCCATGGTCGTGGCGGTACTATCGGTCGTGGCGGTGC ACCAGCGCACGCTGCACTCTTATCTCAACCACCTAAGAGCTTAAAAGGTGGCCTACGAGTAACAGAGCAAGGTGAGATGA TCCGATTCAAACTTGGTCTTCCTGAAGTGGCTGTAAACAGCTTTAACTTGTATGCAAGTGCAATTCTTGAAGCGAACCTT CTTCCACCACCAGAACCGAAACAAGAATGGCGCGACCTAATGGAAGTGTTATCAGAAGTATCGTGTGAAGCTTACCGTAA CGTCGTTCGTGGCGAAAAAGACTTTGTCCCTTACTTCCGTGCAGCAACACCAGAATTAGAGCTAGGTAAACTTCCTCTCG GTTCTCGCCCAGCAAAACGTAACCCAAATGGTGGCGTTGAAAGTTTACGTGCTATTCCATGGATTTTCTCATGGAGTCAA AACCGCTTAGTACTTCCTGCATGGTTAGGTGCTGGTGAAGCCATTCAATATTCAATTGATAAAGGTCACCAGGCACTATT AGAAGAGATGTGTCGTGAATGGCCATTCTTCTCAACACGCCTTGGTATGCTGGAGATGGTTTATACTAAGTGTAACCCTC AAATGTCAGAATACTACGATCAACGCTTAACCGATAAGTCACTATGGCCATTAGGCGAGCGTCTGCGTAATCAACTACAA GCTGATATCAAAGCGGTACTAAACGTAGAAAACAATGATCACTTAATGGAGCGTGACCCATGGGGCTCTGAATCCATTCG TTTACGCAATATCTATGTTGACCCATTGAACATGCTGCAAGCAGAGCTTCTGTTCCGTACTCGTCAACAAGAAGAGACGT CACCAGAGCTTGAAGAAGCGCTAATGGTAACTATAGCGGGTATTGCTGCAGGTATGCGCAACACAGGTTAA
Upstream 100 bases:
>100_bases ACAAATATTCACCAATATTTGACGAGTAGCCTTAAATTCGGATAGATTGAAGGCAGTAAAAAATCAGGATGTAACAAAAT TACAAGTATAGGAAGTATGT
Downstream 100 bases:
>100_bases TCCATTTTAGATTAATAGCATCCTTCCTAATTAAAGGTCACTTCGGTGGCCTTTTTTATTTTTACTTTCTCTTTGTATCT CAAGATATCGACATCAAAAA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MNEKYAALKSNVSMLGHLLGNTIRDAHGEELLAKVETIRKLSKTARAGSDEDRNALIEEIKSLPDDQLTPVARAFSQFLN LTNMAEQYHTISRHCEAHVCEPDAISTLFSKLSQSNVSKLDTAQAVRELNIELVLTAHPTEIARRTMINKLVKINECLSK LELGDISFSERDKTERRLEQLIAQAWHSDVIRQERPTPLDEAKWGFAVVENSLWQGIPEFLREFDQRLEGHLGEGLPIDA RPVHMSSWMGGDRDGNPFVTHKITREVMLLSRWKAADLYLKDINELISELSMVKCTDEVRELAGDQHEPYRAILKQLRTL LGDTLESLDAQMKGELAPNKVILTDADQLWNPLYACYQSLHACGMGIIADGSLLDTLRRVKAFGAHLVRLDIRQESTRHS DVLSELTRYLGIGDYDQWSEQDKISFLVNELSSKRPLLPRKWEPSPEVQEVIDTCKVVAEQSKEALGSYVISMARTASDV LAVHLLLQEAGCPFRMDVCPLFETLDDLNRSKEVMEQLFSIDWYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYSAMEA LVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANL LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ NRLVLPAWLGAGEAIQYSIDKGHQALLEEMCREWPFFSTRLGMLEMVYTKCNPQMSEYYDQRLTDKSLWPLGERLRNQLQ ADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQAELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG
Sequences:
>Translated_876_residues MNEKYAALKSNVSMLGHLLGNTIRDAHGEELLAKVETIRKLSKTARAGSDEDRNALIEEIKSLPDDQLTPVARAFSQFLN LTNMAEQYHTISRHCEAHVCEPDAISTLFSKLSQSNVSKLDTAQAVRELNIELVLTAHPTEIARRTMINKLVKINECLSK LELGDISFSERDKTERRLEQLIAQAWHSDVIRQERPTPLDEAKWGFAVVENSLWQGIPEFLREFDQRLEGHLGEGLPIDA RPVHMSSWMGGDRDGNPFVTHKITREVMLLSRWKAADLYLKDINELISELSMVKCTDEVRELAGDQHEPYRAILKQLRTL LGDTLESLDAQMKGELAPNKVILTDADQLWNPLYACYQSLHACGMGIIADGSLLDTLRRVKAFGAHLVRLDIRQESTRHS DVLSELTRYLGIGDYDQWSEQDKISFLVNELSSKRPLLPRKWEPSPEVQEVIDTCKVVAEQSKEALGSYVISMARTASDV LAVHLLLQEAGCPFRMDVCPLFETLDDLNRSKEVMEQLFSIDWYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYSAMEA LVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANL LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ NRLVLPAWLGAGEAIQYSIDKGHQALLEEMCREWPFFSTRLGMLEMVYTKCNPQMSEYYDQRLTDKSLWPLGERLRNQLQ ADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQAELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG >Mature_876_residues MNEKYAALKSNVSMLGHLLGNTIRDAHGEELLAKVETIRKLSKTARAGSDEDRNALIEEIKSLPDDQLTPVARAFSQFLN LTNMAEQYHTISRHCEAHVCEPDAISTLFSKLSQSNVSKLDTAQAVRELNIELVLTAHPTEIARRTMINKLVKINECLSK LELGDISFSERDKTERRLEQLIAQAWHSDVIRQERPTPLDEAKWGFAVVENSLWQGIPEFLREFDQRLEGHLGEGLPIDA RPVHMSSWMGGDRDGNPFVTHKITREVMLLSRWKAADLYLKDINELISELSMVKCTDEVRELAGDQHEPYRAILKQLRTL LGDTLESLDAQMKGELAPNKVILTDADQLWNPLYACYQSLHACGMGIIADGSLLDTLRRVKAFGAHLVRLDIRQESTRHS DVLSELTRYLGIGDYDQWSEQDKISFLVNELSSKRPLLPRKWEPSPEVQEVIDTCKVVAEQSKEALGSYVISMARTASDV LAVHLLLQEAGCPFRMDVCPLFETLDDLNRSKEVMEQLFSIDWYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYSAMEA LVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANL LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ NRLVLPAWLGAGEAIQYSIDKGHQALLEEMCREWPFFSTRLGMLEMVYTKCNPQMSEYYDQRLTDKSLWPLGERLRNQLQ ADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQAELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=884, Percent_Identity=65.7239819004525, Blast_Score=1171, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 98896; Mature: 98896
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKYAALKSNVSMLGHLLGNTIRDAHGEELLAKVETIRKLSKTARAGSDEDRNALIEEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KSLPDDQLTPVARAFSQFLNLTNMAEQYHTISRHCEAHVCEPDAISTLFSKLSQSNVSKL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DTAQAVRELNIELVLTAHPTEIARRTMINKLVKINECLSKLELGDISFSERDKTERRLEQ HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIAQAWHSDVIRQERPTPLDEAKWGFAVVENSLWQGIPEFLREFDQRLEGHLGEGLPIDA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RPVHMSSWMGGDRDGNPFVTHKITREVMLLSRWKAADLYLKDINELISELSMVKCTDEVR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAGDQHEPYRAILKQLRTLLGDTLESLDAQMKGELAPNKVILTDADQLWNPLYACYQSL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHH HACGMGIIADGSLLDTLRRVKAFGAHLVRLDIRQESTRHSDVLSELTRYLGIGDYDQWSE HHCCCCEEECCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHCCC QDKISFLVNELSSKRPLLPRKWEPSPEVQEVIDTCKVVAEQSKEALGSYVISMARTASDV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVHLLLQEAGCPFRMDVCPLFETLDDLNRSKEVMEQLFSIDWYRGFIQNHQMVMIGYSD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC SAKDAGVMSAGWAQYSAMEALVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHH LKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEV HHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ HHHHHHHHHCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCC NRLVLPAWLGAGEAIQYSIDKGHQALLEEMCREWPFFSTRLGMLEMVYTKCNPQMSEYYD CCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH QRLTDKSLWPLGERLRNQLQADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQ HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHH AELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEKYAALKSNVSMLGHLLGNTIRDAHGEELLAKVETIRKLSKTARAGSDEDRNALIEEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KSLPDDQLTPVARAFSQFLNLTNMAEQYHTISRHCEAHVCEPDAISTLFSKLSQSNVSKL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DTAQAVRELNIELVLTAHPTEIARRTMINKLVKINECLSKLELGDISFSERDKTERRLEQ HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIAQAWHSDVIRQERPTPLDEAKWGFAVVENSLWQGIPEFLREFDQRLEGHLGEGLPIDA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RPVHMSSWMGGDRDGNPFVTHKITREVMLLSRWKAADLYLKDINELISELSMVKCTDEVR CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAGDQHEPYRAILKQLRTLLGDTLESLDAQMKGELAPNKVILTDADQLWNPLYACYQSL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHH HACGMGIIADGSLLDTLRRVKAFGAHLVRLDIRQESTRHSDVLSELTRYLGIGDYDQWSE HHCCCCEEECCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHCCC QDKISFLVNELSSKRPLLPRKWEPSPEVQEVIDTCKVVAEQSKEALGSYVISMARTASDV HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVHLLLQEAGCPFRMDVCPLFETLDDLNRSKEVMEQLFSIDWYRGFIQNHQMVMIGYSD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC SAKDAGVMSAGWAQYSAMEALVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHH LKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEV HHCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ HHHHHHHHHCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCC NRLVLPAWLGAGEAIQYSIDKGHQALLEEMCREWPFFSTRLGMLEMVYTKCNPQMSEYYD CCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH QRLTDKSLWPLGERLRNQLQADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQ HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHH AELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA