| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712909
Identifier: 59712909
GI number: 59712909
Start: 2586238
End: 2586486
Strand: Direct
Name: 59712909
Synonym: VF_2302
Alternate gene names: NA
Gene position: 2586238-2586486 (Clockwise)
Preceding gene: 59712908
Following gene: 59712914
Centisome position: 89.26
GC content: 37.35
Gene sequence:
>249_bases ATGACATGTAAAACTTGTCGCTCAGACATTTTCAAACAAAAACTAGGTCGCTGTACGCGTTGTATGAAACAACTGACATT TCTTTCTATTGGGGGATGGTTGACTTGGTTGGAGTTCTTTCAAATGACGCCATATAAAATAGAAGCTATCGCCACATTTA TGGTGAGTTCAGCCTTTACTGGCTTACTTGTTTTACATCTTATCGCTATGGCTTATTACCGTTTGAATAATACCAATAAC AACAAGTGA
Upstream 100 bases:
>100_bases CAGATTAAAAAGTCCAAAAATAAAAAGACCAATGTTTGCGCATTGGTCTTTTTGCATTTAAAGTTCTCTCCACTCGCTTA CCAATCAAAGAACTCAATAC
Downstream 100 bases:
>100_bases GCAGATAAAATAAAGCCCCAATACCATATAAGTATTGGGGCCTCTTAGAATCTTTCTAAGAAAAAGCAGTATTAATAAGA CTAATACTTAATTAAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTCKTCRSDIFKQKLGRCTRCMKQLTFLSIGGWLTWLEFFQMTPYKIEAIATFMVSSAFTGLLVLHLIAMAYYRLNNTNN NK
Sequences:
>Translated_82_residues MTCKTCRSDIFKQKLGRCTRCMKQLTFLSIGGWLTWLEFFQMTPYKIEAIATFMVSSAFTGLLVLHLIAMAYYRLNNTNN NK >Mature_81_residues TCKTCRSDIFKQKLGRCTRCMKQLTFLSIGGWLTWLEFFQMTPYKIEAIATFMVSSAFTGLLVLHLIAMAYYRLNNTNNN K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9525; Mature: 9394
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKTCRSDIFKQKLGRCTRCMKQLTFLSIGGWLTWLEFFQMTPYKIEAIATFMVSSAFT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLLVLHLIAMAYYRLNNTNNNK HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TCKTCRSDIFKQKLGRCTRCMKQLTFLSIGGWLTWLEFFQMTPYKIEAIATFMVSSAFT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GLLVLHLIAMAYYRLNNTNNNK HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA