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The map label for this gene is pilM

Identifier: 59712904

GI number: 59712904

Start: 2579066

End: 2580067

Strand: Reverse

Name: pilM

Synonym: VF_2297

Alternate gene names: NA

Gene position: 2580067-2579066 (Counterclockwise)

Preceding gene: 59712906

Following gene: 59712903

Centisome position: 89.04

GC content: 37.03

Gene sequence:

>1002_bases
ATGATCTACCCCACTATTACAGGTTTAGATGTAGGGCATCATAGCATTAAAGCCGTATCTGTAAGGTTAAAGAAAGGTCA
ATTAGATCTCGTTAGTTCTTTCGAAGTTTTATTGCCTGAATCTGTATTTGTGGATACTAATAATTTAAATGTCGAAGAAT
TAAAGCCTTACTTATCTCGAATAAAGAAACAGTTAAAGCTAAATCAAAAGCAAGTCGCGTTCTCTATCCCTGATAGCAGT
ATTACAAGCAAGGTTGTTCAAATTGATAGTCAACTTGATGAGCGAGAAACCGAGTTTGCTATTGCTCATAATTTTGAACA
GCACTCTTCTTTTTCATCTGATGATCTGAATATAGATTATGTAGCCTCTGAACATAGAGGAACAGGCAGCTTACAGACGA
TCACTTACCAAGTTTTTGCGACCCGAAAAGATTTAGTTAACTCTCGTCAGCGTTGTTTTGAATCTGCTGGACTTAAACCT
GTACTGGCAGATGCTCATTCAAATGCACTTTTAACCTTATGGCAGAGAGCGATAGCGGTTTATCCCGATAAAAAAAATTG
GATGCTCATTGATATTGGTTATATGCAAACTGTTTTTTGTATTGCTTCTCCGAGTCAACATTTATATAGCAAACACATTT
TATTTGGTGCTATAGCTCAAGAGAAAGAGACAAATTCAACTAACGAAGATAACTCAATTGATCTGTCCGCTGGGACGCTT
TTTATTAAGCAGTTATCTGAACATATTCATCGTCAAGTGACTCTTTATTCATCGGTTAATCAACATAAGGTTGAAGGCGT
ATGGATTACTGGTGGTGGCTCAATGCTACCAGGGTTATCGGATTCGTTAAGCTACGAACTATCGTTACCAACGGTGGATT
TAAATCTACTTTCTTTGTTTCAAACACCAAAGAAAAGAGTGGGTTCGTTTCATGAACAAAAAAATCAATACGCATCAGCT
CTTGGATTGGCATTGAGAGGGATTGAATGGCTTACCAAATAA

Upstream 100 bases:

>100_bases
GTTTCTGACCCATAACTGAGTAGTATAAATATAACACAACAAAAAATAACGCAAATAAACGCTTAATTTTGAGATATTTA
TTACTTGGAGTTAAATCAGG

Downstream 100 bases:

>100_bases
ACCTATTACCTTGGCGAGAAAAGCAGAGAGCAAGATATAAGCAACGTTTTATTGCATTACTTTGTGCTGGGGTGACGCTA
TCTGTCGGTATTCAATGGGG

Product: pili assembly protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Pili Assembly Protein PilM; Type IV Pilus Biogenesis Protein TapM; Type IV Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis ATPase PilM; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIYPTITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSRIKKQLKLNQKQVAFSIPDSS
ITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDYVASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKP
VLADAHSNALLTLWQRAIAVYPDKKNWMLIDIGYMQTVFCIASPSQHLYSKHILFGAIAQEKETNSTNEDNSIDLSAGTL
FIKQLSEHIHRQVTLYSSVNQHKVEGVWITGGGSMLPGLSDSLSYELSLPTVDLNLLSLFQTPKKRVGSFHEQKNQYASA
LGLALRGIEWLTK

Sequences:

>Translated_333_residues
MIYPTITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSRIKKQLKLNQKQVAFSIPDSS
ITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDYVASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKP
VLADAHSNALLTLWQRAIAVYPDKKNWMLIDIGYMQTVFCIASPSQHLYSKHILFGAIAQEKETNSTNEDNSIDLSAGTL
FIKQLSEHIHRQVTLYSSVNQHKVEGVWITGGGSMLPGLSDSLSYELSLPTVDLNLLSLFQTPKKRVGSFHEQKNQYASA
LGLALRGIEWLTK
>Mature_333_residues
MIYPTITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSRIKKQLKLNQKQVAFSIPDSS
ITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDYVASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKP
VLADAHSNALLTLWQRAIAVYPDKKNWMLIDIGYMQTVFCIASPSQHLYSKHILFGAIAQEKETNSTNEDNSIDLSAGTL
FIKQLSEHIHRQVTLYSSVNQHKVEGVWITGGGSMLPGLSDSLSYELSLPTVDLNLLSLFQTPKKRVGSFHEQKNQYASA
LGLALRGIEWLTK

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37267; Mature: 37267

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPTITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSR
CCCCCEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
IKKQLKLNQKQVAFSIPDSSITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDY
HHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHCCCCCCCCEEEE
VASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKPVLADAHSNALLTLWQRAIAV
EECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHEE
YPDKKNWMLIDIGYMQTVFCIASPSQHLYSKHILFGAIAQEKETNSTNEDNSIDLSAGTL
CCCCCCEEEEEEHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH
FIKQLSEHIHRQVTLYSSVNQHKVEGVWITGGGSMLPGLSDSLSYELSLPTVDLNLLSLF
HHHHHHHHHHHEEHEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEECHHHHHHH
QTPKKRVGSFHEQKNQYASALGLALRGIEWLTK
HCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYPTITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSR
CCCCCEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
IKKQLKLNQKQVAFSIPDSSITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDY
HHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHCCCCCCCCEEEE
VASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKPVLADAHSNALLTLWQRAIAV
EECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHEE
YPDKKNWMLIDIGYMQTVFCIASPSQHLYSKHILFGAIAQEKETNSTNEDNSIDLSAGTL
CCCCCCEEEEEEHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH
FIKQLSEHIHRQVTLYSSVNQHKVEGVWITGGGSMLPGLSDSLSYELSLPTVDLNLLSLF
HHHHHHHHHHHEEHEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEECHHHHHHH
QTPKKRVGSFHEQKNQYASALGLALRGIEWLTK
HCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA