| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is aroK [H]
Identifier: 59712899
GI number: 59712899
Start: 2574908
End: 2575426
Strand: Reverse
Name: aroK [H]
Synonym: VF_2292
Alternate gene names: 59712899
Gene position: 2575426-2574908 (Counterclockwise)
Preceding gene: 59712900
Following gene: 59712898
Centisome position: 88.88
GC content: 42.0
Gene sequence:
>519_bases ATGGCTGAAAAACGAAATATTTTCCTTGTTGGCCCAATGGGCGCCGGCAAAAGCACAATTGGTAGACACTTAGCTCAACA ACTTCATATGGAGTTTCTTGATTCTGATACGGTAATCGAAGAACGCACAGGCGCAGATATTGCTTGGGTTTTCGATGTTG AAGGTGAAGAAGGTTTCCGCAAACGTGAAGAAGGTGTGATTAACGATCTTACTCAAGAGCAAGGTATTGTTCTTGCGACG GGTGGTGGCTCTGTAATTAGTAAAGAGAGTCGTAATCGTTTATCTGCTCGTGGTGTTGTTGTATATCTTGAAACTACAAT TGAGAAGCAGTTAGCACGCACACAACGTGATAAAAAACGTCCACTGCTTCAAACTGATGAGCCTCGTGAAGTGTTAGAAG CACTAGCGAAAGAACGTAACGCACTTTATGAAGAAGTGTCTGATTACGTTGTTCGTACCGATGATCAAAGTGCAAAAGTA GTTGCAAACCAAATCATTCAAATGCTTGAAGAGCGTTAA
Upstream 100 bases:
>100_bases TCACGAAATATCTGTGAGGAATATGGTGCCACAGGCGAGCGTCTATTAAAGAGACAACTGTTGGCAATGTCGTTAATGAA CTTTGCATAATTTCTGAAAA
Downstream 100 bases:
>100_bases TTTAAGCAATTAATAGATATAAAGTGGGAACGAATCATGGAAACGATTCATGTAGATTTAGCAGAACGTAGCTATCCCAT CTCTATCGGCGCCGAGTTGT
Product: shikimate kinase I
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFRKREEGVINDLTQEQGIVLAT GGGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKV VANQIIQMLEER
Sequences:
>Translated_172_residues MAEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFRKREEGVINDLTQEQGIVLAT GGGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKV VANQIIQMLEER >Mature_171_residues AEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFRKREEGVINDLTQEQGIVLATG GGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKVV ANQIIQMLEER
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=171, Percent_Identity=82.4561403508772, Blast_Score=284, Evalue=2e-78, Organism=Escherichia coli, GI1786587, Length=159, Percent_Identity=30.8176100628931, Blast_Score=89, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=154, Percent_Identity=33.1168831168831, Blast_Score=68, Evalue=8e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19372; Mature: 19241
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFR CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCHHHH KREEGVINDLTQEQGIVLATGGGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKR HHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCC PLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKVVANQIIQMLEER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFR CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCHHHH KREEGVINDLTQEQGIVLATGGGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKR HHHHHHHHHHHHHCCEEEEECCCCEECHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCC PLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKVVANQIIQMLEER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA