Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59712864

Identifier: 59712864

GI number: 59712864

Start: 2533185

End: 2533586

Strand: Direct

Name: 59712864

Synonym: VF_2257

Alternate gene names: NA

Gene position: 2533185-2533586 (Clockwise)

Preceding gene: 59712863

Following gene: 59712865

Centisome position: 87.43

GC content: 36.32

Gene sequence:

>402_bases
ATGTCAAAGAAAACAGATAATGGTATTTGGTTTGCTTATATTGCAAGCCTACTAACTCCAATCACTCTTATGGTTTCAGG
AATTATTGCAATCATTTATGCGGGCTACCAAATGAATAAAGGCACTAATGATGAAGTCATCGATAGTCACTACTACGCGA
TCATTAAAAGCTTTTTCCTTTTTCTTACATTTTTCGTTGTTTTAGCAGTAACGGCTGCAACAATGAGTGGTATGGCTGCG
GGTCTCGATTACTGGGTAGATAGCTCTATCCTTGATAAAGTTTATGCTGCTATTCCAGTTGTTGGTGCAGTAATCTCAGT
TCTTGCTATTGGTACTTGGTTCGTTAAATTAGCGAAAGGTATGCAAAAACTTAAAGCATATCAACCAATTGAAAATCAAT
AA

Upstream 100 bases:

>100_bases
AAAAGAATGCTGAAATAACCGCTACTACTTAGCAAGTATATTCCCATAATAAAAATAAGGTATATACTTGCTACATTCAT
TTCATTACTGGACAAATATT

Downstream 100 bases:

>100_bases
TATAAAGGCACTCAATGTGCCTTTTTTATTTCGAGTTATAAAATAAATATTTGACGAAGATCATACTAACTAGAAAGTGA
TCTTCACGGATTTTACTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAA
GLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ

Sequences:

>Translated_133_residues
MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAA
GLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ
>Mature_132_residues
SKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFLFLTFFVVLAVTAATMSGMAAG
LDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKGMQKLKAYQPIENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14574; Mature: 14443

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH
FLTFFVVLAVTAATMSGMAAGLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQKLKAYQPIENQ
HHHHHHCCCCCCC
>Mature Secondary Structure 
SKKTDNGIWFAYIASLLTPITLMVSGIIAIIYAGYQMNKGTNDEVIDSHYYAIIKSFFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH
FLTFFVVLAVTAATMSGMAAGLDYWVDSSILDKVYAAIPVVGAVISVLAIGTWFVKLAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQKLKAYQPIENQ
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA