| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is glmM [H]
Identifier: 59712755
GI number: 59712755
Start: 2404123
End: 2405535
Strand: Direct
Name: glmM [H]
Synonym: VF_2148
Alternate gene names: 59712755
Gene position: 2404123-2405535 (Clockwise)
Preceding gene: 59712754
Following gene: 59712762
Centisome position: 82.97
GC content: 38.43
Gene sequence:
>1413_bases ATGATTCAATTTGGTACAGGTGGTTGGCGCGCATTTATTGGTGAAGAATTTACCAAAGATAACGTACGTCTTGTTGCTCA AGCACTATCAAATATTATGATTAACGAACAAGTCCAAAATAAAGGGTTTGTTATTGGTTATGACCGTCGTTTCTTATCAG ATAAAGCAGGAAAATGGTTTGCAGAAGTGGTTGCAGCCAATGGCATTAAAGTAAGTTTTATTGATAAGTTTGTTCCAACC CCTATCGTTATGTTCCAAACAAAAGAGATGGGGTGTATCTACTCAGCTTGTATCACTGCATCTCATAACCCTGCAGACTA CAACGGTGTGAAAGTGTTCATCGAAGGTGGTCGTGACGCCGATGAAATCATTACCCAAAAAATCGAACAACAAATTGCTC ATTTAACTCAACAAGATGTTAATGCATTAGAATTTGAAGAAGCGGTTACTGCGGGAAAAATTGAAATCATTAACCCAATG AACGCATTTGTTGACTCAATCATCGACTTTATCGATATCGAATCAATTAAAAAAGCCAACTTACGTGTACTTATCGACCC AATGTTTGGTGTAGCAAAAAATGCGCTTCAAACGGTTTTAATTAATGGTCGTTGTGATGTTGACGTTATCAACGATGGTG AAAACCCTGCATTTGGAGGCTTAATGCCATCGCCAAGTGCCGCTACTTTGTATCGCTTAAAACACTTAGTTGCACACGAA GGTTATGACATTGGTATTGGTACTGATGGAGATGCTGACCGTCTAGGTATTATCGATGAAAAAGGTAATTTTATTCACCC TAATGAAGTCCTAATTCTCCTTTACTACTACTTACTTGAGTACAAAGGCTGGAAAGGCTCAGTGGTTCGTAATATTGCAA CGACTCACTTGCTTGATAAAGTCGCAGCAGATCACGGCGAAAAATGCTTTGAGGTACCTGTAGGCTTTAAGCACATCAGC TCCCAAATGGAAGCCGATGATTCTTTAATCGGTGGGGAAAGTTCAGGTGGTTTAACCATTCGTGGACACATTAAAGGTAA AGATGGCGTATTCGCTTCTAGCTTATTAGTTGAAATGATCAGCGTGACAGGTAAAAAACTATCTGAAATGCTTGATGAGA TTTACGCTAAATATGGTTACGCCTATACAGCGGAAGGCGATTGCACCTTTAAACCAGCAGAAAAAGAAACACTGTATAAT AAAATTTATGTAGAGAAGCAACTGCCTGAATTTGAATATGAAATAGAAAAAGTAAGCTATGAAGATGGTGCAAAAGTTTA CTTTAAAAATGGCGGTTGGGTCATTGCTCGTTTCTCTGGTACCGAACCATTATTACGTATTTTTGCTGAAATGGAAGACA AACCAACTGCAGAAAAAGTACTTAATGAAATGAAAGCTTTCCTTTCTCTTTAG
Upstream 100 bases:
>100_bases TTGTCGTAATTATGGGCTAAGCTCGTTTAATGATGAGCTAAGTGTTATAGACAAAAGTAAGGCACCTTATTCTGGTGCCT TACTATAAAAGGAATTTACT
Downstream 100 bases:
>100_bases TTTCTACGTTTTAACTAAAACAAGAGCTCTAAAGAATTAACCCAGCTAATATAAGAGTCTGTTAGCTGGGTTCTTTTTAC ACTATTAATCCTGAACAAAA
Product: phosphoglucomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MIQFGTGGWRAFIGEEFTKDNVRLVAQALSNIMINEQVQNKGFVIGYDRRFLSDKAGKWFAEVVAANGIKVSFIDKFVPT PIVMFQTKEMGCIYSACITASHNPADYNGVKVFIEGGRDADEIITQKIEQQIAHLTQQDVNALEFEEAVTAGKIEIINPM NAFVDSIIDFIDIESIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGENPAFGGLMPSPSAATLYRLKHLVAHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSEMLDEIYAKYGYAYTAEGDCTFKPAEKETLYN KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKPTAEKVLNEMKAFLSL
Sequences:
>Translated_470_residues MIQFGTGGWRAFIGEEFTKDNVRLVAQALSNIMINEQVQNKGFVIGYDRRFLSDKAGKWFAEVVAANGIKVSFIDKFVPT PIVMFQTKEMGCIYSACITASHNPADYNGVKVFIEGGRDADEIITQKIEQQIAHLTQQDVNALEFEEAVTAGKIEIINPM NAFVDSIIDFIDIESIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGENPAFGGLMPSPSAATLYRLKHLVAHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSEMLDEIYAKYGYAYTAEGDCTFKPAEKETLYN KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKPTAEKVLNEMKAFLSL >Mature_470_residues MIQFGTGGWRAFIGEEFTKDNVRLVAQALSNIMINEQVQNKGFVIGYDRRFLSDKAGKWFAEVVAANGIKVSFIDKFVPT PIVMFQTKEMGCIYSACITASHNPADYNGVKVFIEGGRDADEIITQKIEQQIAHLTQQDVNALEFEEAVTAGKIEIINPM NAFVDSIIDFIDIESIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGENPAFGGLMPSPSAATLYRLKHLVAHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSEMLDEIYAKYGYAYTAEGDCTFKPAEKETLYN KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKPTAEKVLNEMKAFLSL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=468, Percent_Identity=25.6410256410256, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI290463102, Length=456, Percent_Identity=25.4385964912281, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI133922562, Length=533, Percent_Identity=24.015009380863, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI290463104, Length=308, Percent_Identity=25.3246753246753, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1786904, Length=485, Percent_Identity=25.979381443299, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI1788361, Length=473, Percent_Identity=25.369978858351, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789566, Length=487, Percent_Identity=22.7926078028747, Blast_Score=89, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17535441, Length=499, Percent_Identity=26.8537074148297, Blast_Score=125, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323752, Length=530, Percent_Identity=27.7358490566038, Blast_Score=120, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322722, Length=427, Percent_Identity=26.463700234192, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323934, Length=430, Percent_Identity=23.7209302325581, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI17864244, Length=527, Percent_Identity=26.7552182163188, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI20129809, Length=544, Percent_Identity=25.1838235294118, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24651977, Length=425, Percent_Identity=25.6470588235294, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24653722, Length=420, Percent_Identity=24.5238095238095, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52134; Mature: 52134
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFGTGGWRAFIGEEFTKDNVRLVAQALSNIMINEQVQNKGFVIGYDRRFLSDKAGKWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCHHHHHH AEVVAANGIKVSFIDKFVPTPIVMFQTKEMGCIYSACITASHNPADYNGVKVFIEGGRDA HHHHHCCCCEEEEEHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCH DEIITQKIEQQIAHLTQQDVNALEFEEAVTAGKIEIINPMNAFVDSIIDFIDIESIKKAN HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGENPAFGGLMPSPSAATLYRLKHLVAHE CEEEECCHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAADHGEKCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSEMLDEIYAKYGYAYTAEGDCTFKPAEKETLYNKIYVEKQLPEFEYEIEKVSY HHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCHHHHHHHHEEEECCCCCHHHHHHEECC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKPTAEKVLNEMKAFLSL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIQFGTGGWRAFIGEEFTKDNVRLVAQALSNIMINEQVQNKGFVIGYDRRFLSDKAGKWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCHHHHHH AEVVAANGIKVSFIDKFVPTPIVMFQTKEMGCIYSACITASHNPADYNGVKVFIEGGRDA HHHHHCCCCEEEEEHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCH DEIITQKIEQQIAHLTQQDVNALEFEEAVTAGKIEIINPMNAFVDSIIDFIDIESIKKAN HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGENPAFGGLMPSPSAATLYRLKHLVAHE CEEEECCHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAADHGEKCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSEMLDEIYAKYGYAYTAEGDCTFKPAEKETLYNKIYVEKQLPEFEYEIEKVSY HHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCHHHHHHHHEEEECCCCCHHHHHHEECC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKPTAEKVLNEMKAFLSL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]