| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 59712718
Identifier: 59712718
GI number: 59712718
Start: 2347115
End: 2347294
Strand: Direct
Name: 59712718
Synonym: VF_2111
Alternate gene names: NA
Gene position: 2347115-2347294 (Clockwise)
Preceding gene: 59712713
Following gene: 59712722
Centisome position: 81.0
GC content: 37.22
Gene sequence:
>180_bases ATGGATGGGTACACACTAAACGATATATTAGCAACGAAAACAACAACGACAAAAAAGAAGCAAGCCAAACGTCTATGGCG TGAGATTGAAGAGATTCAAGATCGTCGTCAATTATTACATGAGCTTAAAGAGCTCGACCCTTTTTTCAACGGCAATCTAG ACGATGTTTATCTAAAATAA
Upstream 100 bases:
>100_bases TGAGAAACAGTTCAAGGTCATAATCTATTCTCTATGATACTTAATAGCATGCTAAATGGATGGTTTTACTCTTTGTAATA ATTAATAAAATGAGGTGCTT
Downstream 100 bases:
>100_bases TCAATAAAAAAGGAGAGTCTAGTGCTCTCCTTTTTTATGAAATGACCTTTACCTAACTTTTTTCGCTAATTCTCGATAAC GTTTATCAACGGTCTCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MDGYTLNDILATKTTTTKKKQAKRLWREIEEIQDRRQLLHELKELDPFFNGNLDDVYLK
Sequences:
>Translated_59_residues MDGYTLNDILATKTTTTKKKQAKRLWREIEEIQDRRQLLHELKELDPFFNGNLDDVYLK >Mature_59_residues MDGYTLNDILATKTTTTKKKQAKRLWREIEEIQDRRQLLHELKELDPFFNGNLDDVYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7095; Mature: 7095
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGYTLNDILATKTTTTKKKQAKRLWREIEEIQDRRQLLHELKELDPFFNGNLDDVYLK CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC >Mature Secondary Structure MDGYTLNDILATKTTTTKKKQAKRLWREIEEIQDRRQLLHELKELDPFFNGNLDDVYLK CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA