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The map label for this gene is yaaA [C]

Identifier: 59712716

GI number: 59712716

Start: 2344070

End: 2344849

Strand: Reverse

Name: yaaA [C]

Synonym: VF_2109

Alternate gene names: 59712716

Gene position: 2344849-2344070 (Counterclockwise)

Preceding gene: 59712717

Following gene: 59712715

Centisome position: 80.93

GC content: 35.77

Gene sequence:

>780_bases
ATGCTTATTGTGGTTTCTCCAGCAAAAACACTCGATTATGAAACACCGCTACCAACATCTGCTTTTACTCAACCTGATTT
CATTTCAGATTCGGCTGAGTTAATTAAGGCATGCAGAACATTAACGCCTGTTGATATCGCTAAGTTAATGAAAGTAAGTG
ATAAAATTGCCAGTTTAAATGCTGTTCGCTTTGAAGAGTGGTCAACGACGTTTACTCAAGAGAATGCTCGACCTGCCTTA
TTTGCTTTTAAAGGGGATGTATACACAGGTTTAGATGCGAACAGTTTGAGTGAGAGTGAGATTGAGTACGCTCAAACCAA
TTTGAGAATGTTATCTGGCTTGTATGGACTATTAAAGCCACTGGATTTAATGCAGCCTTATCGTCTTGAAATGGGAACTA
AACTTGAAAATGGGCGAGGTTCAAATTTGTATCAATTTTGGGGAAGTTTAATCACCAATAAACTTAACCAAGAGTTAGAA
GCTCAAGGTTCTGAAACACTAGTTAATTTAGCATCTAATGAGTACTTTAAATCGGTTAAGCCAAAGGAGCTAAAAGCAGA
TATTGTTACTCCTGTATTTAAAGATTGCAAAAATGGACAGTATAAAATTATTAGTTTTTATGCGAAAAAAGCTCGTGGAT
TAATGGCTCGCTTTATTATTCAAAATAAGATTTCTAATGTTGAAGAACTAAAGAGTTTTGATAGTGATGGATATTACTTT
GTTGAGGCGGAATCAACAGCAACGACGTTAGTCTTTAAGCGAGAAGAGCAGAATAAATAA

Upstream 100 bases:

>100_bases
CATCAAATAAATAGATAAAGCCATGCATTCGAGCGTGGCTTTTTTTTATTTGAATCGTTAATATCTTGTATATATAAAAA
TACAAAGGGATATCTTGCTC

Downstream 100 bases:

>100_bases
ATATTTTAATAAATGAAATGTCAATAAAGTGTTTCACATTTGTGTTTAACTGGTTATATTAACTAGGTGGTTGTAATTTA
AACTTTTTCAGCTTCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLIVVSPAKTLDYETPLPTSAFTQPDFISDSAELIKACRTLTPVDIAKLMKVSDKIASLNAVRFEEWSTTFTQENARPAL
FAFKGDVYTGLDANSLSESEIEYAQTNLRMLSGLYGLLKPLDLMQPYRLEMGTKLENGRGSNLYQFWGSLITNKLNQELE
AQGSETLVNLASNEYFKSVKPKELKADIVTPVFKDCKNGQYKIISFYAKKARGLMARFIIQNKISNVEELKSFDSDGYYF
VEAESTATTLVFKREEQNK

Sequences:

>Translated_259_residues
MLIVVSPAKTLDYETPLPTSAFTQPDFISDSAELIKACRTLTPVDIAKLMKVSDKIASLNAVRFEEWSTTFTQENARPAL
FAFKGDVYTGLDANSLSESEIEYAQTNLRMLSGLYGLLKPLDLMQPYRLEMGTKLENGRGSNLYQFWGSLITNKLNQELE
AQGSETLVNLASNEYFKSVKPKELKADIVTPVFKDCKNGQYKIISFYAKKARGLMARFIIQNKISNVEELKSFDSDGYYF
VEAESTATTLVFKREEQNK
>Mature_259_residues
MLIVVSPAKTLDYETPLPTSAFTQPDFISDSAELIKACRTLTPVDIAKLMKVSDKIASLNAVRFEEWSTTFTQENARPAL
FAFKGDVYTGLDANSLSESEIEYAQTNLRMLSGLYGLLKPLDLMQPYRLEMGTKLENGRGSNLYQFWGSLITNKLNQELE
AQGSETLVNLASNEYFKSVKPKELKADIVTPVFKDCKNGQYKIISFYAKKARGLMARFIIQNKISNVEELKSFDSDGYYF
VEAESTATTLVFKREEQNK

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=61.4785992217899, Blast_Score=346, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2109_VIBF1 (Q5E2Z2)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205492.1
- STRING:   Q5E2Z2
- GeneID:   3279302
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_2109
- NMPDR:   fig|312309.3.peg.2108
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q5E2Z2
- ProtClustDB:   PRK02101
- BioCyc:   VFIS312309:VF2109-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29204; Mature: 29204

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVVSPAKTLDYETPLPTSAFTQPDFISDSAELIKACRTLTPVDIAKLMKVSDKIASLN
CEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AVRFEEWSTTFTQENARPALFAFKGDVYTGLDANSLSESEIEYAQTNLRMLSGLYGLLKP
HEEHHHHCCHHHCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLENGRGSNLYQFWGSLITNKLNQELEAQGSETLVNLASNEYFKSVK
HHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKELKADIVTPVFKDCKNGQYKIISFYAKKARGLMARFIIQNKISNVEELKSFDSDGYYF
CHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEE
VEAESTATTLVFKREEQNK
EEECCCEEEEEEECCCCCC
>Mature Secondary Structure
MLIVVSPAKTLDYETPLPTSAFTQPDFISDSAELIKACRTLTPVDIAKLMKVSDKIASLN
CEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AVRFEEWSTTFTQENARPALFAFKGDVYTGLDANSLSESEIEYAQTNLRMLSGLYGLLKP
HEEHHHHCCHHHCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLENGRGSNLYQFWGSLITNKLNQELEAQGSETLVNLASNEYFKSVK
HHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKELKADIVTPVFKDCKNGQYKIISFYAKKARGLMARFIIQNKISNVEELKSFDSDGYYF
CHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEE
VEAESTATTLVFKREEQNK
EEECCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA