| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712617
Identifier: 59712617
GI number: 59712617
Start: 2244346
End: 2244819
Strand: Reverse
Name: 59712617
Synonym: VF_2010
Alternate gene names: NA
Gene position: 2244819-2244346 (Counterclockwise)
Preceding gene: 59712618
Following gene: 59712616
Centisome position: 77.47
GC content: 40.3
Gene sequence:
>474_bases ATGAAAGCGCTGCAAAGTTTAAGTGAGTTATTTGCCCATCATGTTACTGAACCTAAACACTTAAACGTGTGGGCAGAAGA TGGCGAGTTGATATGTACCCAAGGCTTGATTGTTGATGGATTCGATATTGCTTATACCGTTTTGGTTGATATCTATTCAG CAGAGATTCAACCGCATATTTTAATGATGCATCTGATCGCCTGGCTTAATAAATATGATGTGGCCCGTGAAGAAAAAGGG TTAGCACCACCATCCTTTGCGACAGAACTGTTAGATAAAGGCAAGTGCGATATTAAGTTGCGTATTGATATCCAAGAGTC CTATTCGCTTATTGAAAATGAAAAGGGCAGTTGGTTGCAAAATGGCATTCGATACGAGTGTGTCAGTCAATTTGAAGAGG CGGTGGTAGAAGAGGATTTACTATCACTTCAGTTCATTAATGGGCCTAAGGATTTACCAGCATCATGCAGTTAA
Upstream 100 bases:
>100_bases AGGCCATTCAAGCAAAAGCTGATCATGCATTAGTTCAATATCGTCGTGCGATTGATTTATTGCTTAACGGTAAAGAAACC TACTTTTTTGCGGTGGTGTA
Downstream 100 bases:
>100_bases CTAGCCCAGAGCAATTAAGCCATGCAATTAACAACTTGCTGTTAACCGATGCAGAAGCATTTGAATTAAATCGACGATTG GCCAACCGTTCTCGGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKALQSLSELFAHHVTEPKHLNVWAEDGELICTQGLIVDGFDIAYTVLVDIYSAEIQPHILMMHLIAWLNKYDVAREEKG LAPPSFATELLDKGKCDIKLRIDIQESYSLIENEKGSWLQNGIRYECVSQFEEAVVEEDLLSLQFINGPKDLPASCS
Sequences:
>Translated_157_residues MKALQSLSELFAHHVTEPKHLNVWAEDGELICTQGLIVDGFDIAYTVLVDIYSAEIQPHILMMHLIAWLNKYDVAREEKG LAPPSFATELLDKGKCDIKLRIDIQESYSLIENEKGSWLQNGIRYECVSQFEEAVVEEDLLSLQFINGPKDLPASCS >Mature_157_residues MKALQSLSELFAHHVTEPKHLNVWAEDGELICTQGLIVDGFDIAYTVLVDIYSAEIQPHILMMHLIAWLNKYDVAREEKG LAPPSFATELLDKGKCDIKLRIDIQESYSLIENEKGSWLQNGIRYECVSQFEEAVVEEDLLSLQFINGPKDLPASCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17736; Mature: 17736
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALQSLSELFAHHVTEPKHLNVWAEDGELICTQGLIVDGFDIAYTVLVDIYSAEIQPHI CHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCEEECCHHHHHHHHHHHHHHCCCHHH LMMHLIAWLNKYDVAREEKGLAPPSFATELLDKGKCDIKLRIDIQESYSLIENEKGSWLQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCHHH NGIRYECVSQFEEAVVEEDLLSLQFINGPKDLPASCS CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC >Mature Secondary Structure MKALQSLSELFAHHVTEPKHLNVWAEDGELICTQGLIVDGFDIAYTVLVDIYSAEIQPHI CHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCEEECCHHHHHHHHHHHHHHCCCHHH LMMHLIAWLNKYDVAREEKGLAPPSFATELLDKGKCDIKLRIDIQESYSLIENEKGSWLQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCHHH NGIRYECVSQFEEAVVEEDLLSLQFINGPKDLPASCS CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA