| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712618
Identifier: 59712618
GI number: 59712618
Start: 2244819
End: 2245268
Strand: Reverse
Name: 59712618
Synonym: VF_2011
Alternate gene names: NA
Gene position: 2245268-2244819 (Counterclockwise)
Preceding gene: 59712619
Following gene: 59712617
Centisome position: 77.49
GC content: 39.33
Gene sequence:
>450_bases ATGCAGTTTGTTGGAAATAAAGACGAAGAATATGCATCGGTGCTACCAAAGACAGATATCTATCCAGAACTAGCAATATC AGAGTTTCAGCGTGTGTTTCATTTTTTGAGCGATGAAACAGAAGCGGGAATTTTACACAATGCAACCGTTGCGAGAGTGA CAGTAAATCGTGAACTAATGGAAACCATAACACCATTTAAAACACTGGATGCGTTATCAATGGAGCGGTTTGGTGAAACA CAAACAGGAACGCTGTTATACAAACAAGCTGTATTTTCATTAGCTGCGAATGCCATTATTAACAATCAATTAAGCATGAA TGCCACAAAAGAGGCGGCAGACAGACAAGAGGCCATTCAAGCAAAAGCTGATCATGCATTAGTTCAATATCGTCGTGCGA TTGATTTATTGCTTAACGGTAAAGAAACCTACTTTTTTGCGGTGGTGTAA
Upstream 100 bases:
>100_bases CAATAAAAGTACACCCCCCATGCAGGCAAACACCGCTTTATCAAAAGAGTTTATGTTTTGCTATTAGCTAAGTGTTTAGC CTGCACCTAACGAGGTTCTT
Downstream 100 bases:
>100_bases TGAAAGCGCTGCAAAGTTTAAGTGAGTTATTTGCCCATCATGTTACTGAACCTAAACACTTAAACGTGTGGGCAGAAGAT GGCGAGTTGATATGTACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQFVGNKDEEYASVLPKTDIYPELAISEFQRVFHFLSDETEAGILHNATVARVTVNRELMETITPFKTLDALSMERFGET QTGTLLYKQAVFSLAANAIINNQLSMNATKEAADRQEAIQAKADHALVQYRRAIDLLLNGKETYFFAVV
Sequences:
>Translated_149_residues MQFVGNKDEEYASVLPKTDIYPELAISEFQRVFHFLSDETEAGILHNATVARVTVNRELMETITPFKTLDALSMERFGET QTGTLLYKQAVFSLAANAIINNQLSMNATKEAADRQEAIQAKADHALVQYRRAIDLLLNGKETYFFAVV >Mature_149_residues MQFVGNKDEEYASVLPKTDIYPELAISEFQRVFHFLSDETEAGILHNATVARVTVNRELMETITPFKTLDALSMERFGET QTGTLLYKQAVFSLAANAIINNQLSMNATKEAADRQEAIQAKADHALVQYRRAIDLLLNGKETYFFAVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16764; Mature: 16764
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVGNKDEEYASVLPKTDIYPELAISEFQRVFHFLSDETEAGILHNATVARVTVNRELM CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEHHHHHH ETITPFKTLDALSMERFGETQTGTLLYKQAVFSLAANAIINNQLSMNATKEAADRQEAIQ HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AKADHALVQYRRAIDLLLNGKETYFFAVV HHHHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MQFVGNKDEEYASVLPKTDIYPELAISEFQRVFHFLSDETEAGILHNATVARVTVNRELM CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEHHHHHH ETITPFKTLDALSMERFGETQTGTLLYKQAVFSLAANAIINNQLSMNATKEAADRQEAIQ HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AKADHALVQYRRAIDLLLNGKETYFFAVV HHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA