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The map label for this gene is yfjF [H]

Identifier: 59712607

GI number: 59712607

Start: 2235842

End: 2236153

Strand: Reverse

Name: yfjF [H]

Synonym: VF_2000

Alternate gene names: 59712607

Gene position: 2236153-2235842 (Counterclockwise)

Preceding gene: 59712608

Following gene: 59712603

Centisome position: 77.17

GC content: 36.86

Gene sequence:

>312_bases
ATGACTGTAATTAACGAAATGATCCACGTAGAAGTTGTTTATGCTCTGCCAACGGAACAAGTTGTATTTAAATTAGCGGT
AAAAGCAGAACAAACCGTAGAAGAGATCATTGTTCAATCTGGCGTATTAGAACGTTACCCTGAGATTGATTTAAAAGTGA
ATAAAGTCGGTGTGTTTAGCCGTAACGTTAAACTAGATTCGACAATTCGAGATAAAGATCGCATTGAAATCTATCGCCCA
CTATTAGCTGATCCAAAAGAAATTCGTCGAAAAAGAGCTGAGCAAGCTAAGAAAGAAGCGGCAAAAAAATAA

Upstream 100 bases:

>100_bases
GAATTTTCCAATGCGTTAGTTGCGATGGCATTTGGGAAAGTGTTTCAAGAATTAACTAATAATATGGTGAATTCATTTAC
TCAAAGAGCGAAGCAAGTAT

Downstream 100 bases:

>100_bases
TTTCTTAGTTTAAGAAAATAAAAAACCGGATTTCGTTAAACGAGATCCGGTTTTTTTGTGTTTGAAATACGGTGAGGAAA
TTAAAGCTTCTCGAAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTVINEMIHVEVVYALPTEQVVFKLAVKAEQTVEEIIVQSGVLERYPEIDLKVNKVGVFSRNVKLDSTIRDKDRIEIYRP
LLADPKEIRRKRAEQAKKEAAKK

Sequences:

>Translated_103_residues
MTVINEMIHVEVVYALPTEQVVFKLAVKAEQTVEEIIVQSGVLERYPEIDLKVNKVGVFSRNVKLDSTIRDKDRIEIYRP
LLADPKEIRRKRAEQAKKEAAKK
>Mature_102_residues
TVINEMIHVEVVYALPTEQVVFKLAVKAEQTVEEIIVQSGVLERYPEIDLKVNKVGVFSRNVKLDSTIRDKDRIEIYRPL
LADPKEIRRKRAEQAKKEAAKK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=89, Percent_Identity=53.9325842696629, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 11904; Mature: 11773

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVINEMIHVEVVYALPTEQVVFKLAVKAEQTVEEIIVQSGVLERYPEIDLKVNKVGVFS
CCHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
RNVKLDSTIRDKDRIEIYRPLLADPKEIRRKRAEQAKKEAAKK
CCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVINEMIHVEVVYALPTEQVVFKLAVKAEQTVEEIIVQSGVLERYPEIDLKVNKVGVFS
CHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
RNVKLDSTIRDKDRIEIYRPLLADPKEIRRKRAEQAKKEAAKK
CCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA