| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yfjG [C]
Identifier: 59712608
GI number: 59712608
Start: 2236140
End: 2236577
Strand: Reverse
Name: yfjG [C]
Synonym: VF_2001
Alternate gene names: 59712608
Gene position: 2236577-2236140 (Counterclockwise)
Preceding gene: 59712610
Following gene: 59712607
Centisome position: 77.19
GC content: 38.13
Gene sequence:
>438_bases ATGCCTCAGGTTAGCCGATCTGCATTAGTGCCGTTTAGCGCAAAGCAGATGTACGATTTAGTCAATGATGTTGCGTCATA CCCTCAGTTTTTACCTGGTTGCTCAGGTTCTAAGATCTTAGAGCAAACAGAAAGTACAATGGTAGCGTCTGTTGATGTCG CAAAAGCGGGCATAAAGAAAACATTTACAACCAAAAATACCTTAATTGACTCTGAAATGATTGGAATGAATCTTGTTGAT GGCCCATTTAAATCATTAACCGGCGGTTGGCATTTTATGGCACTCGATGAAACCGCTTGTAAGGTTGAGTTAAAGTTAGA TTTTGAATTTTCCAATGCGTTAGTTGCGATGGCATTTGGGAAAGTGTTTCAAGAATTAACTAATAATATGGTGAATTCAT TTACTCAAAGAGCGAAGCAAGTATATGACTGTAATTAA
Upstream 100 bases:
>100_bases TAGGTATTTAATAGCCTTTTTTATCTCGAGTTCAGGTTATATATACTCAAGCTAATTCAAGATGGTATGATGCTTACCTC TATAATGTAAAGGATAATTT
Downstream 100 bases:
>100_bases CGAAATGATCCACGTAGAAGTTGTTTATGCTCTGCCAACGGAACAAGTTGTATTTAAATTAGCGGTAAAAGCAGAACAAA CCGTAGAAGAGATCATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPQVSRSALVPFSAKQMYDLVNDVASYPQFLPGCSGSKILEQTESTMVASVDVAKAGIKKTFTTKNTLIDSEMIGMNLVD GPFKSLTGGWHFMALDETACKVELKLDFEFSNALVAMAFGKVFQELTNNMVNSFTQRAKQVYDCN
Sequences:
>Translated_145_residues MPQVSRSALVPFSAKQMYDLVNDVASYPQFLPGCSGSKILEQTESTMVASVDVAKAGIKKTFTTKNTLIDSEMIGMNLVD GPFKSLTGGWHFMALDETACKVELKLDFEFSNALVAMAFGKVFQELTNNMVNSFTQRAKQVYDCN >Mature_144_residues PQVSRSALVPFSAKQMYDLVNDVASYPQFLPGCSGSKILEQTESTMVASVDVAKAGIKKTFTTKNTLIDSEMIGMNLVDG PFKSLTGGWHFMALDETACKVELKLDFEFSNALVAMAFGKVFQELTNNMVNSFTQRAKQVYDCN
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=145, Percent_Identity=64.1379310344827, Blast_Score=208, Evalue=9e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 15969; Mature: 15837
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVSRSALVPFSAKQMYDLVNDVASYPQFLPGCSGSKILEQTESTMVASVDVAKAGIKK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFTTKNTLIDSEMIGMNLVDGPFKSLTGGWHFMALDETACKVELKLDFEFSNALVAMAFG HHCCCHHHHCHHHHCCCCCCCCHHHHCCCEEEEEECCCEEEEEEEEEECHHHHHHHHHHH KVFQELTNNMVNSFTQRAKQVYDCN HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PQVSRSALVPFSAKQMYDLVNDVASYPQFLPGCSGSKILEQTESTMVASVDVAKAGIKK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TFTTKNTLIDSEMIGMNLVDGPFKSLTGGWHFMALDETACKVELKLDFEFSNALVAMAFG HHCCCHHHHCHHHHCCCCCCCCHHHHCCCEEEEEECCCEEEEEEEEEECHHHHHHHHHHH KVFQELTNNMVNSFTQRAKQVYDCN HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA