| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pstC [H]
Identifier: 59712592
GI number: 59712592
Start: 2217309
End: 2219516
Strand: Reverse
Name: pstC [H]
Synonym: VF_1985
Alternate gene names: 59712592
Gene position: 2219516-2217309 (Counterclockwise)
Preceding gene: 59712593
Following gene: 59712591
Centisome position: 76.6
GC content: 37.95
Gene sequence:
>2208_bases ATGGCATACGCCAAACCTAATCAGAGAGCTCGAGATAAACAGCGTCGTGTTGTTGATCTGATTATGCGTGTCTGGGTTAA GTCTAGTGGGGTTGGGATCATTGCAGCCCTTTTGCTTATTTGTTTTTATTTATTGGCGGTGATCTCTCCTATCTTCACCT CTGTTAATGTTGAGCCAATAAATCAATATAAAACAAAGTACACTCACGCTACTCTTGCTATCGGCTCTGATGAGCAAGGT AAAATGGTTTATCGTATTGATGAATCAGGAAAAGTGCAGTTTATTGATCTTCTTAATAAACGACAGGTGAGTGAGCAGCA AATAATAAGTAATCCAACCGCCTTTACCACGACAATTGAAAGCCAAGATTGGTTTGCATTTGGTGATGAAAAAGGTCGTG TTCAATTTGCTCAAATTGGATTTCAAACAAATTATTCCAAAGGAAATCGTCAACTTATTCCTTATGTAGAGTCATTTGTT CCTTTCCCTTCACTTCAACTTGATGAAAATAAGAAAGCCTTGACCCAGCTAGCATTAAGTTTGACTCCGAATGAGGGGGT GGTATTAGGGAAAACAGAAGATAATCGTCTTCTTGGTTTAGAGTTAGATGCCAGTATAAATCAGATGACGGGTGAGACAC TTTGGGAAGCAATTCCTATTCACTTTAATGGAACGAATAAAGTGAAGAATTTATTATCTATGGTGATCACTCCAAATAAT GATTTTCTTTATTTACTGTACCAACATGAATTGCAAGTGTGGAGCTTAAATGATCATCAGGCTTCATTACGTGAAAGTAT CCCTTTGAAAGAATCGGCACAAAAACTCACGTTATTAGCTGGTGCTCATTCGGTACTTGTTCAGTTTGATAATGGCAGCT TTTCTCAATGGTTCGATACCATTAATAATGAAAAACGTTCACTCACTTTAATTAGGACGTTTAATTTTGATGCACCTATC GAGTTACTTTCTCCTGAAGTTTACCGGAAAGGGGTAAGTGTGATTGATGAAAAAGGCAATTTAACGTTAATTCATACTAC GACCGAAAAAGCACTATTTACTCAGCATGTATTTAATGATTCTGTTTTGGCGGCGACTCAACCACCTAATGGTGAAAAAT TAATTGTACTGACTCAATCTGGGTGGCAGTGTTTTAACGTCACAAACCCTCACCCAGAAGTCAGTATCCAATCTGTTTTT GGAAAGGTGTGGTATGAAGGCTATCCAGAACCTGCTTATATTTGGCAATCAACAGCTGCAAACGATGACTTTGAATCAAA ATTTAGTTTAATGCCTTTGGCGTTTGGTACATTAAAAGCTGCGTTTTATGCGTTGATTTTTGCTGGACCTATTGCCATTG GTAGTGCGATTTATACCGCCTATTTTATGTCTGCCAATGTGCGTCGTTATGTAAAACCAACCATTGAAATTATGGAAGCG TTACCGACAGTTATTATTGGGTTATTAGCTGGTATTTGGTTAGCCCCGATAGTCGAAAATAACTTAATTGCGGTCTTTAG TATATTGGTGTTCTTCCCATTAAGTATGATTATTATCGCGTTTGTATGGCACATTTTACCTGCTCATATTATGCGTAAGT TGCCTCGTGGGCAGCATGCTATTTTATTAATACCGGCACTGATTGTTATAGGTTATTTTACTTTTCAATATGGTTATGTA ATTGAAGATTGGTTGTTTGGCGGTGATTTACGTAATTATTTAGGTGATAAAGGCGTTGCGTATGATCAAAGGAATGCGCT AGTTGTTGGCATTGCAATGGGAGCTGCAATCATTCCAACTATTTATACTATTGCTGAAGATGCTATTTTTTCTGTACCAA AACATTTATCTGAAGGCTCATTAGCTTTAGGGGCAACTCAGTGGCAAACGTTAACTAAAGTTGTGTTATTAACTGCAAGT CCTGGTATTTTTTCTGCTGTGATGATGGGGCTAGGTCGTGCTGTTGGCGAAACCATGATTGTATTAATGGCCACGGGAAA TACCCCAATTATGGATGGTAATATTTTAGAGGGCATGAGAACGCTAGCTGCAAATATTGCTATTGAAATGCCTGAATCGG AAATGGGTAGTACGCATTTTAGAATGTTGTTTTTAGCTGCATTTTTATTGTTTGTTTTCACCTTTTTTGTTAACTCATTG GCGGAATGGATCCGTCAAGGGTTACGTGAAAAGTATCGTAGTTTGTAG
Upstream 100 bases:
>100_bases TGGCCGATTTAAGTCGGTTGATTTTGTTTGTCATTATAGTGTCACTCCTATAATGAAGAATACATTTTATCCACATTATA AAAATAGAGGTTAACCCATC
Downstream 100 bases:
>100_bases GTGTATCTGAATGAAAATAAAAATGAAAACATGGATTAAATCAGGTTCACCATGGATATGGCTTACAGCAGGGTCCGTAA GTATCAGTATGATCTCGGTA
Product: phosphate transport system permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MAYAKPNQRARDKQRRVVDLIMRVWVKSSGVGIIAALLLICFYLLAVISPIFTSVNVEPINQYKTKYTHATLAIGSDEQG KMVYRIDESGKVQFIDLLNKRQVSEQQIISNPTAFTTTIESQDWFAFGDEKGRVQFAQIGFQTNYSKGNRQLIPYVESFV PFPSLQLDENKKALTQLALSLTPNEGVVLGKTEDNRLLGLELDASINQMTGETLWEAIPIHFNGTNKVKNLLSMVITPNN DFLYLLYQHELQVWSLNDHQASLRESIPLKESAQKLTLLAGAHSVLVQFDNGSFSQWFDTINNEKRSLTLIRTFNFDAPI ELLSPEVYRKGVSVIDEKGNLTLIHTTTEKALFTQHVFNDSVLAATQPPNGEKLIVLTQSGWQCFNVTNPHPEVSIQSVF GKVWYEGYPEPAYIWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA LPTVIIGLLAGIWLAPIVENNLIAVFSILVFFPLSMIIIAFVWHILPAHIMRKLPRGQHAILLIPALIVIGYFTFQYGYV IEDWLFGGDLRNYLGDKGVAYDQRNALVVGIAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTAS PGIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL AEWIRQGLREKYRSL
Sequences:
>Translated_735_residues MAYAKPNQRARDKQRRVVDLIMRVWVKSSGVGIIAALLLICFYLLAVISPIFTSVNVEPINQYKTKYTHATLAIGSDEQG KMVYRIDESGKVQFIDLLNKRQVSEQQIISNPTAFTTTIESQDWFAFGDEKGRVQFAQIGFQTNYSKGNRQLIPYVESFV PFPSLQLDENKKALTQLALSLTPNEGVVLGKTEDNRLLGLELDASINQMTGETLWEAIPIHFNGTNKVKNLLSMVITPNN DFLYLLYQHELQVWSLNDHQASLRESIPLKESAQKLTLLAGAHSVLVQFDNGSFSQWFDTINNEKRSLTLIRTFNFDAPI ELLSPEVYRKGVSVIDEKGNLTLIHTTTEKALFTQHVFNDSVLAATQPPNGEKLIVLTQSGWQCFNVTNPHPEVSIQSVF GKVWYEGYPEPAYIWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA LPTVIIGLLAGIWLAPIVENNLIAVFSILVFFPLSMIIIAFVWHILPAHIMRKLPRGQHAILLIPALIVIGYFTFQYGYV IEDWLFGGDLRNYLGDKGVAYDQRNALVVGIAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTAS PGIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL AEWIRQGLREKYRSL >Mature_734_residues AYAKPNQRARDKQRRVVDLIMRVWVKSSGVGIIAALLLICFYLLAVISPIFTSVNVEPINQYKTKYTHATLAIGSDEQGK MVYRIDESGKVQFIDLLNKRQVSEQQIISNPTAFTTTIESQDWFAFGDEKGRVQFAQIGFQTNYSKGNRQLIPYVESFVP FPSLQLDENKKALTQLALSLTPNEGVVLGKTEDNRLLGLELDASINQMTGETLWEAIPIHFNGTNKVKNLLSMVITPNND FLYLLYQHELQVWSLNDHQASLRESIPLKESAQKLTLLAGAHSVLVQFDNGSFSQWFDTINNEKRSLTLIRTFNFDAPIE LLSPEVYRKGVSVIDEKGNLTLIHTTTEKALFTQHVFNDSVLAATQPPNGEKLIVLTQSGWQCFNVTNPHPEVSIQSVFG KVWYEGYPEPAYIWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEAL PTVIIGLLAGIWLAPIVENNLIAVFSILVFFPLSMIIIAFVWHILPAHIMRKLPRGQHAILLIPALIVIGYFTFQYGYVI EDWLFGGDLRNYLGDKGVAYDQRNALVVGIAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASP GIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSLA EWIRQGLREKYRSL
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 82035; Mature: 81904
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAKPNQRARDKQRRVVDLIMRVWVKSSGVGIIAALLLICFYLLAVISPIFTSVNVEPI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NQYKTKYTHATLAIGSDEQGKMVYRIDESGKVQFIDLLNKRQVSEQQIISNPTAFTTTIE HHHHHHHEEEEEEECCCCCCCEEEEECCCCCEEEEEHHHHHCCCHHHHHCCCCEEEEEEC SQDWFAFGDEKGRVQFAQIGFQTNYSKGNRQLIPYVESFVPFPSLQLDENKKALTQLALS CCCCEEECCCCCCEEEEEECEEECCCCCCCEECCHHHHHCCCCCCEECCCHHHHHHHHHE LTPNEGVVLGKTEDNRLLGLELDASINQMTGETLWEAIPIHFNGTNKVKNLLSMVITPNN ECCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEEEECCHHHHHHHHHEEEECCC DFLYLLYQHELQVWSLNDHQASLRESIPLKESAQKLTLLAGAHSVLVQFDNGSFSQWFDT CEEEEEEECCEEEEECCCHHHHHHHCCCCHHHHHHEEHEECCEEEEEEECCCCHHHHHHH INNEKRSLTLIRTFNFDAPIELLSPEVYRKGVSVIDEKGNLTLIHTTTEKALFTQHVFND HCCCCCEEEEEEEECCCCCHHHCCHHHHHCCCHHEECCCCEEEEEECCHHHHHHHHHCCC SVLAATQPPNGEKLIVLTQSGWQCFNVTNPHPEVSIQSVFGKVWYEGYPEPAYIWQSTAA CEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEECCCC NDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA CCCCHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LPTVIIGLLAGIWLAPIVENNLIAVFSILVFFPLSMIIIAFVWHILPAHIMRKLPRGQHA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILLIPALIVIGYFTFQYGYVIEDWLFGGDLRNYLGDKGVAYDQRNALVVGIAMGAAIIPT HHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHH IYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASPGIFSAVMMGLGRAVGETMI HHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCEEE VLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL EEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEWIRQGLREKYRSL HHHHHHHHHHHHHCC >Mature Secondary Structure AYAKPNQRARDKQRRVVDLIMRVWVKSSGVGIIAALLLICFYLLAVISPIFTSVNVEPI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NQYKTKYTHATLAIGSDEQGKMVYRIDESGKVQFIDLLNKRQVSEQQIISNPTAFTTTIE HHHHHHHEEEEEEECCCCCCCEEEEECCCCCEEEEEHHHHHCCCHHHHHCCCCEEEEEEC SQDWFAFGDEKGRVQFAQIGFQTNYSKGNRQLIPYVESFVPFPSLQLDENKKALTQLALS CCCCEEECCCCCCEEEEEECEEECCCCCCCEECCHHHHHCCCCCCEECCCHHHHHHHHHE LTPNEGVVLGKTEDNRLLGLELDASINQMTGETLWEAIPIHFNGTNKVKNLLSMVITPNN ECCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEEEECCHHHHHHHHHEEEECCC DFLYLLYQHELQVWSLNDHQASLRESIPLKESAQKLTLLAGAHSVLVQFDNGSFSQWFDT CEEEEEEECCEEEEECCCHHHHHHHCCCCHHHHHHEEHEECCEEEEEEECCCCHHHHHHH INNEKRSLTLIRTFNFDAPIELLSPEVYRKGVSVIDEKGNLTLIHTTTEKALFTQHVFND HCCCCCEEEEEEEECCCCCHHHCCHHHHHCCCHHEECCCCEEEEEECCHHHHHHHHHCCC SVLAATQPPNGEKLIVLTQSGWQCFNVTNPHPEVSIQSVFGKVWYEGYPEPAYIWQSTAA CEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHEEECCCC NDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA CCCCHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LPTVIIGLLAGIWLAPIVENNLIAVFSILVFFPLSMIIIAFVWHILPAHIMRKLPRGQHA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILLIPALIVIGYFTFQYGYVIEDWLFGGDLRNYLGDKGVAYDQRNALVVGIAMGAAIIPT HHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHH IYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASPGIFSAVMMGLGRAVGETMI HHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCEEE VLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL EEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEWIRQGLREKYRSL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]