| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pstA [H]
Identifier: 59712591
GI number: 59712591
Start: 2215763
End: 2217298
Strand: Reverse
Name: pstA [H]
Synonym: VF_1984
Alternate gene names: 59712591
Gene position: 2217298-2215763 (Counterclockwise)
Preceding gene: 59712592
Following gene: 59712590
Centisome position: 76.52
GC content: 37.24
Gene sequence:
>1536_bases ATGAAAATAAAAATGAAAACATGGATTAAATCAGGTTCACCATGGATATGGCTTACAGCAGGGTCCGTAAGTATCAGTAT GATCTCGGTACTCGGGATATTATTGCTTATTGGTTGGAAAGGCCTCTCTTATTTTTGGCCAACGCCATTACAGCAATGGC AAACTGTTGATGGTAAGGTCATTGTTGGTCAGTTATATGATGTACAAAAAGTACATGATGCGAATGCAGATAAAAAAGAA CGATTAGTTATTAAGGTCGGTAATCGAGATATTAATGGTTTCGATTTTATTAATATCGATCAAGACCAAATTAAAACCGT GAGTAAACCTGATGAATTGGTTGTTGTCGATCGAGTTCAGCATGGTAAGTATTTCGGTAAAATTGTAGAAACATCAAATG GTCTTGAATTAAATCGACAGCAAGTAGAGTCTTGGGTTCGTAGTGAAAAGGCGAAAATCGATTTGCTTGAGCAAGAAAGA TATAAACTTTATCGTTTATTAGATGCTCTGCCAAAATCAACACTCTCTAAAGATGAAATATTAATTAAAGAAAAAGCACT GAATAATGAAGTTAATGCCATTTCAAAGCAATTGAGTCATAGTTATTTAGTACTAGAAGATAGCCAAGGTTCTCGTTATC AATTAAGCAGTGATCATGTATTGGATATTTGGTTTCCAAATGCAATGACGGTTAAAGAGAAAGTATATCATTGGCTTGAG TCTGTTTATGAATTTGTATCCGAACCTCCGCGAGAAGCAAACTCTGAGGGCGGAGTATTTCCTGCAATATTTGGCACTAT TTTATTAGTGTTGCTAATGTCGGTGATTGTCATGCCTCTAGGCGTAATCGCAGCCATATATTTACATGAATACGCAAAAC CAAATGTATTAACTCGATTGATCCGTATCGCTGTAATTAACTTAGCAGGTGTACCATCAATTGTTTATGGTGTATTTGGA TTAGGCTTTTTTGTTTATGTGGTGGGGGGAACTCTTGATCAATTGTTTTATTCTAATGAATTACCAACCCCAACATTTGG TACACCTGGTTTATTGTGGTCTGCATTAACATTAGCAATATTAACCTTACCGGTTGTGATTGTTGCGACTGAGGAAGGGT TAAGTCGTATTCCAAACTCGGTTCGACATGGTTCACTGGCATTAGGTGCTACACAGTTTGAAACTTTATGGAAGATCGTT TTACCTATGGCAAGTCCAGCTATCATGACTGGATTAATTTTAGCGGTTGCTCGTGCAGCTGGAGAAGTTGCCCCTTTAAT GTTGGTTGGTGTTGTTAAATTAGCGCCGTCCTTACCTGTTGATAGTGTCGCACCATATTTGCATTTAGATAGAAAATTCA TGCATCTTGGTTATCATATTTATGATGTGGGCTTTCAAAGTCCAAATGTAGAAGCTGCTCGTCCAATTGTGTATGCAACG GCTTTTTTACTTGTCACAGTGATCATCGGATTAAACCTTGCGGCTATTGCTATTCGTAATAACTTACGAGAAAAATACCG AACTTTGGAGTTATAG
Upstream 100 bases:
>100_bases GCATTTTTATTGTTTGTTTTCACCTTTTTTGTTAACTCATTGGCGGAATGGATCCGTCAAGGGTTACGTGAAAAGTATCG TAGTTTGTAGGTGTATCTGA
Downstream 100 bases:
>100_bases TTATATGTATTCATTATCTCCTGATCTTTCTTTTCTATCACCGATGGATGTTAACCACCTGTCTGATGAGAATACCGCGA TAGAAATTAATAATCTTTGC
Product: phosphate transport system permease protein PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKIKMKTWIKSGSPWIWLTAGSVSISMISVLGILLLIGWKGLSYFWPTPLQQWQTVDGKVIVGQLYDVQKVHDANADKKE RLVIKVGNRDINGFDFINIDQDQIKTVSKPDELVVVDRVQHGKYFGKIVETSNGLELNRQQVESWVRSEKAKIDLLEQER YKLYRLLDALPKSTLSKDEILIKEKALNNEVNAISKQLSHSYLVLEDSQGSRYQLSSDHVLDIWFPNAMTVKEKVYHWLE SVYEFVSEPPREANSEGGVFPAIFGTILLVLLMSVIVMPLGVIAAIYLHEYAKPNVLTRLIRIAVINLAGVPSIVYGVFG LGFFVYVVGGTLDQLFYSNELPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIV LPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPVDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYAT AFLLVTVIIGLNLAAIAIRNNLREKYRTLEL
Sequences:
>Translated_511_residues MKIKMKTWIKSGSPWIWLTAGSVSISMISVLGILLLIGWKGLSYFWPTPLQQWQTVDGKVIVGQLYDVQKVHDANADKKE RLVIKVGNRDINGFDFINIDQDQIKTVSKPDELVVVDRVQHGKYFGKIVETSNGLELNRQQVESWVRSEKAKIDLLEQER YKLYRLLDALPKSTLSKDEILIKEKALNNEVNAISKQLSHSYLVLEDSQGSRYQLSSDHVLDIWFPNAMTVKEKVYHWLE SVYEFVSEPPREANSEGGVFPAIFGTILLVLLMSVIVMPLGVIAAIYLHEYAKPNVLTRLIRIAVINLAGVPSIVYGVFG LGFFVYVVGGTLDQLFYSNELPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIV LPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPVDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYAT AFLLVTVIIGLNLAAIAIRNNLREKYRTLEL >Mature_511_residues MKIKMKTWIKSGSPWIWLTAGSVSISMISVLGILLLIGWKGLSYFWPTPLQQWQTVDGKVIVGQLYDVQKVHDANADKKE RLVIKVGNRDINGFDFINIDQDQIKTVSKPDELVVVDRVQHGKYFGKIVETSNGLELNRQQVESWVRSEKAKIDLLEQER YKLYRLLDALPKSTLSKDEILIKEKALNNEVNAISKQLSHSYLVLEDSQGSRYQLSSDHVLDIWFPNAMTVKEKVYHWLE SVYEFVSEPPREANSEGGVFPAIFGTILLVLLMSVIVMPLGVIAAIYLHEYAKPNVLTRLIRIAVINLAGVPSIVYGVFG LGFFVYVVGGTLDQLFYSNELPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIV LPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPVDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYAT AFLLVTVIIGLNLAAIAIRNNLREKYRTLEL
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=192, Percent_Identity=34.8958333333333, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790164, Length=174, Percent_Identity=31.6091954022989, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56845; Mature: 56845
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKMKTWIKSGSPWIWLTAGSVSISMISVLGILLLIGWKGLSYFWPTPLQQWQTVDGKV CEEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEE IVGQLYDVQKVHDANADKKERLVIKVGNRDINGFDFINIDQDQIKTVSKPDELVVVDRVQ EEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHCCCCCCCEEEEECHH HGKYFGKIVETSNGLELNRQQVESWVRSEKAKIDLLEQERYKLYRLLDALPKSTLSKDEI CCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LIKEKALNNEVNAISKQLSHSYLVLEDSQGSRYQLSSDHVLDIWFPNAMTVKEKVYHWLE HHHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH SVYEFVSEPPREANSEGGVFPAIFGTILLVLLMSVIVMPLGVIAAIYLHEYAKPNVLTRL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IRIAVINLAGVPSIVYGVFGLGFFVYVVGGTLDQLFYSNELPTPTFGTPGLLWSALTLAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLPMASPAIMTGLILAVARAA HHHCEEEEEECHHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GEVAPLMLVGVVKLAPSLPVDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYAT CCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHH AFLLVTVIIGLNLAAIAIRNNLREKYRTLEL HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIKMKTWIKSGSPWIWLTAGSVSISMISVLGILLLIGWKGLSYFWPTPLQQWQTVDGKV CEEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEE IVGQLYDVQKVHDANADKKERLVIKVGNRDINGFDFINIDQDQIKTVSKPDELVVVDRVQ EEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHCCCCCCCEEEEECHH HGKYFGKIVETSNGLELNRQQVESWVRSEKAKIDLLEQERYKLYRLLDALPKSTLSKDEI CCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LIKEKALNNEVNAISKQLSHSYLVLEDSQGSRYQLSSDHVLDIWFPNAMTVKEKVYHWLE HHHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH SVYEFVSEPPREANSEGGVFPAIFGTILLVLLMSVIVMPLGVIAAIYLHEYAKPNVLTRL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IRIAVINLAGVPSIVYGVFGLGFFVYVVGGTLDQLFYSNELPTPTFGTPGLLWSALTLAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLPMASPAIMTGLILAVARAA HHHCEEEEEECHHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GEVAPLMLVGVVKLAPSLPVDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYAT CCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHH AFLLVTVIIGLNLAAIAIRNNLREKYRTLEL HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]