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The map label for this gene is yajC [H]

Identifier: 59712575

GI number: 59712575

Start: 2200051

End: 2200386

Strand: Reverse

Name: yajC [H]

Synonym: VF_1968

Alternate gene names: 59712575

Gene position: 2200386-2200051 (Counterclockwise)

Preceding gene: 59712576

Following gene: 59712574

Centisome position: 75.94

GC content: 39.58

Gene sequence:

>336_bases
ATGAGTTTTTTCATCTCTCAAGCTCACGCAGCTGGTGAAGCAGCGCCACAAGGCGGTGGTATGCAAATGTTTATCATGCT
TGGTATGTTTGCTGTTATCTTCTACTTTATGATCTACCGCCCACAAGCGAAACGTCAAAAAGAGCACAAAAACCTAATGG
CTTCTATGAGCAAAGGTGATGAAGTTCTTACTGCAGGTGGCTTAGTAGGTAAAATCACTAAAGTATCTGAAGAAAATGAT
TACATCGTAATTGAGCTTAACGCAAACAACGAAGTAACAATTAAGAAAGATTTTGTTTCAGCTGTTCTGCCAAAGGGCAC
TCTGAAATCACTATAA

Upstream 100 bases:

>100_bases
CTTTAAAAGCAGAGTAATCACCCATATATCTAATGAGATATGTGTATGGTCACATTTTAGAAACTGGAAATTAGAAACTT
AGATACGAGGACGTTATTAA

Downstream 100 bases:

>100_bases
AAATTGTACCCTCTAACTTCGGTTAGGGGGTATTTTTCGTTAAGGACATCGCTGTGTTAAACCGTTTCCCTTTATGGAAG
TATTTGATGGTAGTTTCTGT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSFFISQAHAAGEAAPQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMASMSKGDEVLTAGGLVGKITKVSEEND
YIVIELNANNEVTIKKDFVSAVLPKGTLKSL

Sequences:

>Translated_111_residues
MSFFISQAHAAGEAAPQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMASMSKGDEVLTAGGLVGKITKVSEEND
YIVIELNANNEVTIKKDFVSAVLPKGTLKSL
>Mature_110_residues
SFFISQAHAAGEAAPQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMASMSKGDEVLTAGGLVGKITKVSEENDY
IVIELNANNEVTIKKDFVSAVLPKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=111, Percent_Identity=64.8648648648649, Blast_Score=143, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12177; Mature: 12046

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFISQAHAAGEAAPQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMASMSKGD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EVLTAGGLVGKITKVSEENDYIVIELNANNEVTIKKDFVSAVLPKGTLKSL
CEEECCCCHHHHEEECCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFFISQAHAAGEAAPQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMASMSKGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EVLTAGGLVGKITKVSEENDYIVIELNANNEVTIKKDFVSAVLPKGTLKSL
CEEECCCCHHHHEEECCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]