Click here to switch to the map view.

The map label for this gene is napD [C]

Identifier: 59712513

GI number: 59712513

Start: 2139174

End: 2139458

Strand: Reverse

Name: napD [C]

Synonym: VF_1906

Alternate gene names: 59712513

Gene position: 2139458-2139174 (Counterclockwise)

Preceding gene: 59712514

Following gene: 59712512

Centisome position: 73.84

GC content: 35.09

Gene sequence:

>285_bases
ATGTTAGAGAATTTGCCTGAAAATGAAGTTCATATTTCAAGCTTAGTGGTTCATGTAAGACCTGAGTCACTGGAAATAAC
AAAAGAAAAGATATTAGCACTGCCGAATACGGAAATATATGGAGAAAGTGAAGAGGGCAAGATTATTGTTGTTCTTGAAA
CTGAAAACCAAGGATATATCACCGATTCAATCGATAAAATAAATGACTTCGAAGACGTACTAAATGTCGCTTTAGTATTT
CACCAAATCGAGCACTTTGATTCGCAATGTGAGGATGAATCATGA

Upstream 100 bases:

>100_bases
CTCAACCTAAAATTAATTTTGATGCCTGTAATGGATGTGGTGGCTGTGTTGCTGTTTGCCCTACATCTGCTATCAGCATG
ACACTGGAAGATAGCACATC

Downstream 100 bases:

>100_bases
AAATGACAAGACGTGCGTTTGTTAAAGCAAACGCAGCAGCTTCGGCTGCAGCTGTTGCAGGGGTTACGCTGCCTGCTTCA
GCAACAAATTTAATCGTTAG

Product: protein required for assembly of periplasmic nitrate reductase (NapA)

Products: reduced acceptor; NO3- [C]

Alternate protein names: NapD Family Protein; NapD Protein Of Periplasmic Nitrate Reductase; NapD Protein Subunit Of Nitrate Reductase

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLENLPENEVHISSLVVHVRPESLEITKEKILALPNTEIYGESEEGKIIVVLETENQGYITDSIDKINDFEDVLNVALVF
HQIEHFDSQCEDES

Sequences:

>Translated_94_residues
MLENLPENEVHISSLVVHVRPESLEITKEKILALPNTEIYGESEEGKIIVVLETENQGYITDSIDKINDFEDVLNVALVF
HQIEHFDSQCEDES
>Mature_94_residues
MLENLPENEVHISSLVVHVRPESLEITKEKILALPNTEIYGESEEGKIIVVLETENQGYITDSIDKINDFEDVLNVALVF
HQIEHFDSQCEDES

Specific function: Plays A Role In The Correct Assembly Of Subunits Of The Periplasmic Napab Enzyme. [C]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10724; Mature: 10724

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENLPENEVHISSLVVHVRPESLEITKEKILALPNTEIYGESEEGKIIVVLETENQGYI
CCCCCCCCCEEEEEEEEEECCCCCEECHHHEEECCCCCEECCCCCCEEEEEEEECCCCCE
TDSIDKINDFEDVLNVALVFHQIEHFDSQCEDES
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLENLPENEVHISSLVVHVRPESLEITKEKILALPNTEIYGESEEGKIIVVLETENQGYI
CCCCCCCCCEEEEEEEEEECCCCCEECHHHEEECCCCCEECCCCCCEEEEEEEECCCCCE
TDSIDKINDFEDVLNVALVFHQIEHFDSQCEDES
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA