| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is cheV1 [H]
Identifier: 59712486
GI number: 59712486
Start: 2113119
End: 2114039
Strand: Reverse
Name: cheV1 [H]
Synonym: VF_1879
Alternate gene names: 59712486
Gene position: 2114039-2113119 (Counterclockwise)
Preceding gene: 59712490
Following gene: 59712485
Centisome position: 72.96
GC content: 38.87
Gene sequence:
>921_bases ATGACAGGTATACTGGATTCGGTGAATCAGCGCACACAACTTGTAGGGCAGAACCGTTTAGAACTGCTTACTTTTCGTCT TATGGGACGTCAACGTTATGGTATTAACGTTTTTAAAGTAAAAGAAGTATTACAGTGTCCGAAGTTGACTTCAATGCCAA ATTTAAATCCTTTAGTAAAAGGTATCGCGCATATTCGTGGCCAAACTATCTCTGTTATTGATTTAAGTCTTGCTACTGGC GGTCGTCCAACGACTGAAATTGATAAATGTTTTATTATTATTTCGGAATTTAACCGTACAATTCAAGGTTTCTTAGTAAA ATCGGTAGAGCGTATTGTTAATATGCACTGGGAGGCAATTTTGCCACCGCCACAAGGTACTGGTCGTGCAAACTACCTAA CAGCAGTAACAAATATTGATGAAGAATTAGTTGAGATTTTAGATGTTGAAAAAATCTTAGCTGAGATTGCACCTATCGAC GAAACAATGAACGAAGAACTGGTTGAAGAGATGACATCTATGAGCCAAGAAGTTGTTCGTAAAGTACTTATTGCTGATGA CTCTAGTGTTGCTCGTAAACAAGTACAACGTGCTGTTGAATCTATTGGCTTTGAAACTATCATGGTAAAAGATGGCAAAG AAGCACTGAATAAGCTAGTTGAAATGGCAAATGCTGGTAGCGTATACGAGCAAATCGGCCTAGTTATTTCTGATGTTGAA ATGCCTGAAATGGATGGTTATACATTAACCGCTGAAATTCGTCGTGAGCCAGCACTAAAAGATCTGCACGTTATATTGCA TACTTCACTAAGTGGCGTATTCAACCAAGCAATGGTAGAGCGTGTTGGTGCAAACCAATTCATCGCTAAATTTAATCCTG ATGAGTTAGGTGCGGCCGTGAAGAAGGCTGTTGAAAAATAA
Upstream 100 bases:
>100_bases ATATTTTCAATATAAAATGCCATGTTGTATATCGTGTTCTTCATAGGGTTATGTTAGGCTCGCGGTTTAATTACATAGTG GCACAAGATGGAGTCATATA
Downstream 100 bases:
>100_bases ACAGCATAAAGTAATAAGCTAAATCCTATTGTCGTAGTAATATAAAACGGCAATTCATTTTTTATTTGGAAGTTAAACCG TTAATGACAACTATAACTAT
Product: CheW/CheY hybrid protein CheV1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATG GRPTTEIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDEELVEILDVEKILAEIAPID ETMNEELVEEMTSMSQEVVRKVLIADDSSVARKQVQRAVESIGFETIMVKDGKEALNKLVEMANAGSVYEQIGLVISDVE MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKKAVEK
Sequences:
>Translated_306_residues MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATG GRPTTEIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDEELVEILDVEKILAEIAPID ETMNEELVEEMTSMSQEVVRKVLIADDSSVARKQVQRAVESIGFETIMVKDGKEALNKLVEMANAGSVYEQIGLVISDVE MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKKAVEK >Mature_305_residues TGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVKGIAHIRGQTISVIDLSLATGG RPTTEIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAILPPPQGTGRANYLTAVTNIDEELVEILDVEKILAEIAPIDE TMNEELVEEMTSMSQEVVRKVLIADDSSVARKQVQRAVESIGFETIMVKDGKEALNKLVEMANAGSVYEQIGLVISDVEM PEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAVKKAVEK
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=169, Percent_Identity=26.0355029585799, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 34003; Mature: 33872
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVK CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH GIAHIRGQTISVIDLSLATGGRPTTEIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAI HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LPPPQGTGRANYLTAVTNIDEELVEILDVEKILAEIAPIDETMNEELVEEMTSMSQEVVR CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KVLIADDSSVARKQVQRAVESIGFETIMVKDGKEALNKLVEMANAGSVYEQIGLVISDVE HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCHHHCCCC MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAV CCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH KKAVEK HHHHCC >Mature Secondary Structure TGILDSVNQRTQLVGQNRLELLTFRLMGRQRYGINVFKVKEVLQCPKLTSMPNLNPLVK CCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCCCCCHHHH GIAHIRGQTISVIDLSLATGGRPTTEIDKCFIIISEFNRTIQGFLVKSVERIVNMHWEAI HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE LPPPQGTGRANYLTAVTNIDEELVEILDVEKILAEIAPIDETMNEELVEEMTSMSQEVVR CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KVLIADDSSVARKQVQRAVESIGFETIMVKDGKEALNKLVEMANAGSVYEQIGLVISDVE HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCHHHCCCC MPEMDGYTLTAEIRREPALKDLHVILHTSLSGVFNQAMVERVGANQFIAKFNPDELGAAV CCCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH KKAVEK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]