| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is cheR [H]
Identifier: 59712485
GI number: 59712485
Start: 2112208
End: 2113035
Strand: Reverse
Name: cheR [H]
Synonym: VF_1878
Alternate gene names: 59712485
Gene position: 2113035-2112208 (Counterclockwise)
Preceding gene: 59712486
Following gene: 59712484
Centisome position: 72.93
GC content: 39.73
Gene sequence:
>828_bases ATGACAACTATAACTATCAACGAACAAGAGTATCGTGACTTCAGCCGCTTTCTAGAATCTCAATGTGGTATTGTCCTAGG GGACAGTAAGCAATATTTAGTGAGAAGCCGACTGAGTCCTTTAGTTGCTAAGTTTTCATTAGCTTCATTATCTGATCTAT TACAACAAGTTATTTCTGGTCGTAACCGAGAGCTGCGTGTCGCTGCTGTTGATGCAATGACAACCAATGAAACTTTGTGG TTTAGAGATGGTTACCCATTTACTGTGCTTGCAGACAAATTGTTGCCAGAGTTAGCGGCAAACCGTCGCCCATTAAAAAT TTGGTCAGCGGCAAGTTCATCTGGTCAAGAACCTTATTCCATGGGGATGATCATTTCTGAAATCCAAGCACGTAAGCCGG GCTTTCTTCCTAATATCAGTATTACTGCAACCGATATTTCACCATCAATGCTTGAAACCTGTAAAGCAGGTGTTTATGAC AACTTAGCATTAAGTCGTGGTTTATCTCCTGAACGTCGCCGTGCTTTCTTTGAAGATGCGGGTGATGGCAAGATGAAAAT CAACGATAAAATCAAACGTATGGTGAATTTCCGTCCTCAGAACCTAATGGATAGCTACAGCTTATTGGGTAAGTTTGACA TTATTTTTTGTCGTAACGTATTGATTTACTTTTCACCTGAGATGAAATCTCAAGTGTTAAATCAAATGGCGGCAAGTCTT AACCCTGGTGGCTACTTATTGTTAGGTGCATCGGAATCGTTAACTGGATTAACTGATAAATTTGAGATGGTGCGTTGTAA TCCGGGCATTATTTATAAATTAAAATAA
Upstream 100 bases:
>100_bases AGGCTGTTGAAAAATAAACAGCATAAAGTAATAAGCTAAATCCTATTGTCGTAGTAATATAAAACGGCAATTCATTTTTT ATTTGGAAGTTAAACCGTTA
Downstream 100 bases:
>100_bases TTATGATTGAGTGATTATTGAACAAAAAGCGACTTAGGTCGCTTTTTTTGTGCCTGTAATCTATAGTTGGCTCAGATATT GCTAAATAAATATCGGTAGT
Product: chemotaxis regulator, protein-glutamate methyltransferase, CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLQQVISGRNRELRVAAVDAMTTNETLW FRDGYPFTVLADKLLPELAANRRPLKIWSAASSSGQEPYSMGMIISEIQARKPGFLPNISITATDISPSMLETCKAGVYD NLALSRGLSPERRRAFFEDAGDGKMKINDKIKRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPEMKSQVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Sequences:
>Translated_275_residues MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLQQVISGRNRELRVAAVDAMTTNETLW FRDGYPFTVLADKLLPELAANRRPLKIWSAASSSGQEPYSMGMIISEIQARKPGFLPNISITATDISPSMLETCKAGVYD NLALSRGLSPERRRAFFEDAGDGKMKINDKIKRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPEMKSQVLNQMAASL NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK >Mature_274_residues TTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLQQVISGRNRELRVAAVDAMTTNETLWF RDGYPFTVLADKLLPELAANRRPLKIWSAASSSGQEPYSMGMIISEIQARKPGFLPNISITATDISPSMLETCKAGVYDN LALSRGLSPERRRAFFEDAGDGKMKINDKIKRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPEMKSQVLNQMAASLN PGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=266, Percent_Identity=31.203007518797, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 30810; Mature: 30679
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLQQVISG CEEEEECHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRELRVAAVDAMTTNETLWFRDGYPFTVLADKLLPELAANRRPLKIWSAASSSGQEPYS CCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHH MGMIISEIQARKPGFLPNISITATDISPSMLETCKAGVYDNLALSRGLSPERRRAFFEDA HHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCC GDGKMKINDKIKRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPEMKSQVLNQMAASL CCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure TTITINEQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFSLASLSDLLQQVISG EEEEECHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RNRELRVAAVDAMTTNETLWFRDGYPFTVLADKLLPELAANRRPLKIWSAASSSGQEPYS CCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHH MGMIISEIQARKPGFLPNISITATDISPSMLETCKAGVYDNLALSRGLSPERRRAFFEDA HHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCC GDGKMKINDKIKRMVNFRPQNLMDSYSLLGKFDIIFCRNVLIYFSPEMKSQVLNQMAASL CCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHHC NPGGYLLLGASESLTGLTDKFEMVRCNPGIIYKLK CCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 10400589 [H]