| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712384
Identifier: 59712384
GI number: 59712384
Start: 2006073
End: 2006345
Strand: Reverse
Name: 59712384
Synonym: VF_1777
Alternate gene names: NA
Gene position: 2006345-2006073 (Counterclockwise)
Preceding gene: 59712386
Following gene: 59712382
Centisome position: 69.24
GC content: 37.36
Gene sequence:
>273_bases ATGACAGAACAACTAGACGATTTCATGACGGAAGAAACACTGATTGAAACCGTAAAAAATCAAATTGAAGACGGTAACCC AATTGCAGTTAAAGAAACATTAATGCGCTTAGTTATGACGGGTAACCCACGTGAAGAAGCGATTGAAATGATGGCGTGTG CGCTTGCAATTGAAGTCTTTGATGTAATGAAAAATGGCGCAGAGTTTAATCAAAAGCGTTATAAAGAAAACTTAGAATCA TTGCCAGATATGAGCTTCATGGGTGATGAATAA
Upstream 100 bases:
>100_bases TGTTAAAGTCGATTTTTCTACTGTTAATATTTTCCAAATGAATGCGTTTTTTTACTTTTTCTATGGCATAGTAGACAAAA TTATTAAGTGAGTAGTATCC
Downstream 100 bases:
>100_bases TTCCAATATTTGTAGGCAGTAATTGTCTTTGATATTGAAATAAAAAGGCCTGATAGTGTTAGAACTATCAGGCCTTTTTA TAAAGTCATACGTTAGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTEQLDDFMTEETLIETVKNQIEDGNPIAVKETLMRLVMTGNPREEAIEMMACALAIEVFDVMKNGAEFNQKRYKENLES LPDMSFMGDE
Sequences:
>Translated_90_residues MTEQLDDFMTEETLIETVKNQIEDGNPIAVKETLMRLVMTGNPREEAIEMMACALAIEVFDVMKNGAEFNQKRYKENLES LPDMSFMGDE >Mature_89_residues TEQLDDFMTEETLIETVKNQIEDGNPIAVKETLMRLVMTGNPREEAIEMMACALAIEVFDVMKNGAEFNQKRYKENLESL PDMSFMGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10311; Mature: 10180
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 9.0 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQLDDFMTEETLIETVKNQIEDGNPIAVKETLMRLVMTGNPREEAIEMMACALAIEVF CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVMKNGAEFNQKRYKENLESLPDMSFMGDE HHHHCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TEQLDDFMTEETLIETVKNQIEDGNPIAVKETLMRLVMTGNPREEAIEMMACALAIEVF CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVMKNGAEFNQKRYKENLESLPDMSFMGDE HHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA