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The map label for this gene is yciS [H]

Identifier: 59712364

GI number: 59712364

Start: 1984139

End: 1984405

Strand: Reverse

Name: yciS [H]

Synonym: VF_1757

Alternate gene names: 59712364

Gene position: 1984405-1984139 (Counterclockwise)

Preceding gene: 59712365

Following gene: 59712363

Centisome position: 68.49

GC content: 40.07

Gene sequence:

>267_bases
ATGGCAAGACCTCTTTTATTTTTGATCTCACTGGCTATTGGTGCACAGAATCAAGCTATTGTTAATTTTAATTACCTGTT
AGCTCAAGGTGATTTTCAACTGTCCACATTATTGGGTATTTTCTTTGCAACTGGCTTTGGTTTAGGCTGGTTAATTTGTG
GCAGCATGTATCTAAAAGCGAGCATGACTCAACGCCGCCTTCGCAAACGCTTAGATAAAAAAACGGCTGAGCTTGATAAG
TTGCGAATTGAGTCAACGAAAGGGTAG

Upstream 100 bases:

>100_bases
CATTTTCAATGCATTTAGGTGTATCTTTAGAGCTGTAAAATAAAACTTTTAGATACTCAATTAACTGGAGGTAATTCCAT
CTAGATAATACTCGGGACCG

Downstream 100 bases:

>100_bases
TGACTGAATGTTAGAACTGCTATTCCTATTATTACCTATTGCTGCCGGTTATGGCTGGTATATGGGTAATAGGAGTGCGA
GTCAACAACGCCAAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MARPLLFLISLAIGAQNQAIVNFNYLLAQGDFQLSTLLGIFFATGFGLGWLICGSMYLKASMTQRRLRKRLDKKTAELDK
LRIESTKG

Sequences:

>Translated_88_residues
MARPLLFLISLAIGAQNQAIVNFNYLLAQGDFQLSTLLGIFFATGFGLGWLICGSMYLKASMTQRRLRKRLDKKTAELDK
LRIESTKG
>Mature_87_residues
ARPLLFLISLAIGAQNQAIVNFNYLLAQGDFQLSTLLGIFFATGFGLGWLICGSMYLKASMTQRRLRKRLDKKTAELDKL
RIESTKG

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=75, Percent_Identity=44, Blast_Score=78, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 9855; Mature: 9724

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPLLFLISLAIGAQNQAIVNFNYLLAQGDFQLSTLLGIFFATGFGLGWLICGSMYLKA
CCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTQRRLRKRLDKKTAELDKLRIESTKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARPLLFLISLAIGAQNQAIVNFNYLLAQGDFQLSTLLGIFFATGFGLGWLICGSMYLKA
CCHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTQRRLRKRLDKKTAELDKLRIESTKG
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]