| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712335
Identifier: 59712335
GI number: 59712335
Start: 1951301
End: 1952071
Strand: Direct
Name: 59712335
Synonym: VF_1728
Alternate gene names: NA
Gene position: 1951301-1952071 (Clockwise)
Preceding gene: 59712333
Following gene: 59712336
Centisome position: 67.34
GC content: 36.96
Gene sequence:
>771_bases ATGAAAAAGTTTGCCCGTGCTGCAGTCTTAATGGTTTTAGTCTTTGGACGACCTCAAGCACAAGCTGCCTCTTTACTTGA ACATATAGAGCCAGATTACCAAGAATCCAATCAATCAGAGATCGATCACCACCATGTACTTCACAGCTTAAATGGTCTTC TGTCCATTGATAGCTGGAACCATTTCTCGCATCAACCTTACAATGACTTTGATATTTTAAGCTCTAAAGCACACCAAGCT CAGCATGAGTTAGAAAATATCTGTAAACAAACTGCTCTTATTTCCAATAGCCAGACTCAATTTGCGGGAGTAAAAAATAA TGAACGAGCAAAAATTAAAATTGAGCAAGAATTAAGTGGTCAGGTTAATCAACTGACTGATATCGCAAGAGCGACTGTCG TAGCTGACTCAATTCCTGATTTAGTTACCGCATATGAAGCATTAAATAGAGAAACAACTGTTGTTAGTGTTACTAACCGC TTTTCTCAACCTGCTAAATCTGGGTACAGAGACATAAAATTATTGGTTGAATTACCTAAAACAAAACTCATTGCAGAAAT ACAACTCCACTTAAAAGACATTGCAGATGTTAAGAATGGTGTTGAACATAAGATTTATGAAGAAATTCAAAGTATGGAAC GTCTTGCTTTTGTCGAAAATCGTACATTTACTGAATTTGAAGAAGCTCGATTCACTAAACTAAGAGGTCTTTCTCAATCT CTATATACCAATGCATGGCAGTCATACCTTCCAGCACAAGCTTTTGCATAG
Upstream 100 bases:
>100_bases TCACTTGAAACTGCTATCTATGCCCATATTTCTTAAGTAGGTGTTGCTAAGATATAGTTCTCTTAGTTGCTATTTCTTTC TACTTCATAAAGGAAACAGA
Downstream 100 bases:
>100_bases AATAAATACTAAAAAGAGCAATAAGATTTAATCTTATTGCTCTTCCTTTCATACTCTCTCATCGCTTACGCCATTAATAC CAAAGCCCCAAAAAAAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKKFARAAVLMVLVFGRPQAQAASLLEHIEPDYQESNQSEIDHHHVLHSLNGLLSIDSWNHFSHQPYNDFDILSSKAHQA QHELENICKQTALISNSQTQFAGVKNNERAKIKIEQELSGQVNQLTDIARATVVADSIPDLVTAYEALNRETTVVSVTNR FSQPAKSGYRDIKLLVELPKTKLIAEIQLHLKDIADVKNGVEHKIYEEIQSMERLAFVENRTFTEFEEARFTKLRGLSQS LYTNAWQSYLPAQAFA
Sequences:
>Translated_256_residues MKKFARAAVLMVLVFGRPQAQAASLLEHIEPDYQESNQSEIDHHHVLHSLNGLLSIDSWNHFSHQPYNDFDILSSKAHQA QHELENICKQTALISNSQTQFAGVKNNERAKIKIEQELSGQVNQLTDIARATVVADSIPDLVTAYEALNRETTVVSVTNR FSQPAKSGYRDIKLLVELPKTKLIAEIQLHLKDIADVKNGVEHKIYEEIQSMERLAFVENRTFTEFEEARFTKLRGLSQS LYTNAWQSYLPAQAFA >Mature_256_residues MKKFARAAVLMVLVFGRPQAQAASLLEHIEPDYQESNQSEIDHHHVLHSLNGLLSIDSWNHFSHQPYNDFDILSSKAHQA QHELENICKQTALISNSQTQFAGVKNNERAKIKIEQELSGQVNQLTDIARATVVADSIPDLVTAYEALNRETTVVSVTNR FSQPAKSGYRDIKLLVELPKTKLIAEIQLHLKDIADVKNGVEHKIYEEIQSMERLAFVENRTFTEFEEARFTKLRGLSQS LYTNAWQSYLPAQAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29058; Mature: 29058
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFARAAVLMVLVFGRPQAQAASLLEHIEPDYQESNQSEIDHHHVLHSLNGLLSIDSWN CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCEEECCCC HFSHQPYNDFDILSSKAHQAQHELENICKQTALISNSQTQFAGVKNNERAKIKIEQELSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEHHHHCC QVNQLTDIARATVVADSIPDLVTAYEALNRETTVVSVTNRFSQPAKSGYRDIKLLVELPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHCCHHHHHHHHHCCH TKLIAEIQLHLKDIADVKNGVEHKIYEEIQSMERLAFVENRTFTEFEEARFTKLRGLSQS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LYTNAWQSYLPAQAFA HHHHHHHHHCCHHHCC >Mature Secondary Structure MKKFARAAVLMVLVFGRPQAQAASLLEHIEPDYQESNQSEIDHHHVLHSLNGLLSIDSWN CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCEEECCCC HFSHQPYNDFDILSSKAHQAQHELENICKQTALISNSQTQFAGVKNNERAKIKIEQELSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEHHHHCC QVNQLTDIARATVVADSIPDLVTAYEALNRETTVVSVTNRFSQPAKSGYRDIKLLVELPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHCCHHHHHHHHHCCH TKLIAEIQLHLKDIADVKNGVEHKIYEEIQSMERLAFVENRTFTEFEEARFTKLRGLSQS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LYTNAWQSYLPAQAFA HHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA