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The map label for this gene is 59712336

Identifier: 59712336

GI number: 59712336

Start: 1952421

End: 1953002

Strand: Direct

Name: 59712336

Synonym: VF_1729

Alternate gene names: NA

Gene position: 1952421-1953002 (Clockwise)

Preceding gene: 59712335

Following gene: 59712337

Centisome position: 67.38

GC content: 37.11

Gene sequence:

>582_bases
ATGAAGCGTCTATCACTATTAGGGTTGTTAATATTAACCCCTTTACCCTCTCTCGCCCAAATACATATAACTCCTTCAGT
TGGGTATGCTTCAGGTGGTGAAATTGAAGATACCGAAGGAGAAGTATACGAATTAAAAGGAAATACCGCCTATTCATTAG
CGATCGAAACGGATTACGATGCTGGCCGTATCGGCTTATTTTATAGCAATCAGACAAATGATATTGAAGGTATTAATCAA
AGTTCCAATATGCACTATCTTCATTTTCAAAGTGCGCTAGATTACCAATTAACTAAGAATATCAGTTCGTTTTTTGGATT
AAGTATTGGTGGTACGTATGCGGATGTTGATTGGATAGATGAAAACATTCGATTTTCAGCTGGTGCTTTTGGTGGTTTCC
AATATCACTTTACTGATAATTTTGCATTACAACTAGAAGGACGCTGGCTAGGTACCTCTGTTGATAGCAACTTTGATAGC
AGTTGTGTTTCTACACCAGATAAAAACTCTTGTACGATTAAATATGAAGGAAGCTGGGTCAATCAATTTCAGGCTAATCT
AGGGCTCAGATTCAGTTTTTAA

Upstream 100 bases:

>100_bases
AATTGATCTTATTCAATCAGCAAGTTGGTATAAGCATCACAATGTCATCATAATAGATGCAGATTTGTGGTTTTTATGAA
AAGGAATTCTAGGAGAAAAC

Downstream 100 bases:

>100_bases
TCGCACCTTATTTATGAAAAGAAAGATTAGGCATTTTCAAAACAGTGAAAATGCCTAAAATTACAACACTTAATCATTAT
TTTATAAATAACACAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKRLSLLGLLILTPLPSLAQIHITPSVGYASGGEIEDTEGEVYELKGNTAYSLAIETDYDAGRIGLFYSNQTNDIEGINQ
SSNMHYLHFQSALDYQLTKNISSFFGLSIGGTYADVDWIDENIRFSAGAFGGFQYHFTDNFALQLEGRWLGTSVDSNFDS
SCVSTPDKNSCTIKYEGSWVNQFQANLGLRFSF

Sequences:

>Translated_193_residues
MKRLSLLGLLILTPLPSLAQIHITPSVGYASGGEIEDTEGEVYELKGNTAYSLAIETDYDAGRIGLFYSNQTNDIEGINQ
SSNMHYLHFQSALDYQLTKNISSFFGLSIGGTYADVDWIDENIRFSAGAFGGFQYHFTDNFALQLEGRWLGTSVDSNFDS
SCVSTPDKNSCTIKYEGSWVNQFQANLGLRFSF
>Mature_193_residues
MKRLSLLGLLILTPLPSLAQIHITPSVGYASGGEIEDTEGEVYELKGNTAYSLAIETDYDAGRIGLFYSNQTNDIEGINQ
SSNMHYLHFQSALDYQLTKNISSFFGLSIGGTYADVDWIDENIRFSAGAFGGFQYHFTDNFALQLEGRWLGTSVDSNFDS
SCVSTPDKNSCTIKYEGSWVNQFQANLGLRFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21381; Mature: 21381

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLLGLLILTPLPSLAQIHITPSVGYASGGEIEDTEGEVYELKGNTAYSLAIETDYD
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCC
AGRIGLFYSNQTNDIEGINQSSNMHYLHFQSALDYQLTKNISSFFGLSIGGTYADVDWID
CCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCEECCCEEEEEEECC
ENIRFSAGAFGGFQYHFTDNFALQLEGRWLGTSVDSNFDSSCVSTPDKNSCTIKYEGSWV
CCCEEECCCCCCEEEEEECCEEEEECCEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCC
NQFQANLGLRFSF
EEHHHCCCEEEEC
>Mature Secondary Structure
MKRLSLLGLLILTPLPSLAQIHITPSVGYASGGEIEDTEGEVYELKGNTAYSLAIETDYD
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCC
AGRIGLFYSNQTNDIEGINQSSNMHYLHFQSALDYQLTKNISSFFGLSIGGTYADVDWID
CCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCEECCCEEEEEEECC
ENIRFSAGAFGGFQYHFTDNFALQLEGRWLGTSVDSNFDSSCVSTPDKNSCTIKYEGSWV
CCCEEECCCCCCEEEEEECCEEEEECCEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCC
NQFQANLGLRFSF
EEHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA