| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 59712318
Identifier: 59712318
GI number: 59712318
Start: 1927574
End: 1927873
Strand: Reverse
Name: 59712318
Synonym: VF_1711
Alternate gene names: NA
Gene position: 1927873-1927574 (Counterclockwise)
Preceding gene: 59712319
Following gene: 59712317
Centisome position: 66.53
GC content: 42.33
Gene sequence:
>300_bases ATGGTATCGATTCAAGGGTTGCCGCCTGCGCTGATACAAAAACAGCAAGCAGTAGGTAAAAAGAGCCAAGTTAAAAAGGC GACTGGAAGTAAATCTCTAGTTGCGCAGCCATCAAAAGTGGCGACTGCTGTAACGACACAAGTTAAACAACTGAATGCAT CTGAATATGCGAACTCTCGTGTTCAATATGACTTACCTGAAGGACGTAATCGTCACGCAATGGAAGAATATATGGAAGTC ATGCTTCAAAAGCGTAGAGAGGAACTTGCTCAATTAGTCGGTGTCGATCTCTATATATAA
Upstream 100 bases:
>100_bases GTGATACGGTGACGTGGAAAAAATTACCGGGACGCGAATAGGTTTTAAGATCCAAGCGGGGAGTGAAAGCCTCGCTTAGT TGTTTATTCAAAAGGTCATT
Downstream 100 bases:
>100_bases CGCTAATCCATACCTTTATGTAACTCACATCTTATGTGAATTGGTATGACTTCAATTATGAGAGGTTCAATATGAAACAA GTTATTTATTTTCTTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MVSIQGLPPALIQKQQAVGKKSQVKKATGSKSLVAQPSKVATAVTTQVKQLNASEYANSRVQYDLPEGRNRHAMEEYMEV MLQKRREELAQLVGVDLYI
Sequences:
>Translated_99_residues MVSIQGLPPALIQKQQAVGKKSQVKKATGSKSLVAQPSKVATAVTTQVKQLNASEYANSRVQYDLPEGRNRHAMEEYMEV MLQKRREELAQLVGVDLYI >Mature_99_residues MVSIQGLPPALIQKQQAVGKKSQVKKATGSKSLVAQPSKVATAVTTQVKQLNASEYANSRVQYDLPEGRNRHAMEEYMEV MLQKRREELAQLVGVDLYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11000; Mature: 11000
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIQGLPPALIQKQQAVGKKSQVKKATGSKSLVAQPSKVATAVTTQVKQLNASEYANSR CCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCHHHHHCCC VQYDLPEGRNRHAMEEYMEVMLQKRREELAQLVGVDLYI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVSIQGLPPALIQKQQAVGKKSQVKKATGSKSLVAQPSKVATAVTTQVKQLNASEYANSR CCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCHHHHHCCC VQYDLPEGRNRHAMEEYMEVMLQKRREELAQLVGVDLYI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA