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The map label for this gene is yeaY [C]

Identifier: 59712317

GI number: 59712317

Start: 1926951

End: 1927502

Strand: Reverse

Name: yeaY [C]

Synonym: VF_1710

Alternate gene names: 59712317

Gene position: 1927502-1926951 (Counterclockwise)

Preceding gene: 59712318

Following gene: 59712316

Centisome position: 66.52

GC content: 39.67

Gene sequence:

>552_bases
ATGAAACAAGTTATTTATTTTCTTTCTGTATTATTACTTGTAGGTTGTAGCTCTCTTCCTCAAGAACTTAAATCAACTCA
AGCAACGACTCTGGTTGAATACAATGCTTTCTCTGATGCTGCAAATGCTGGGGAAAAAGCGGAAGTACGATTAGGTGGTG
TGATTGCTCGTCTTGATAACTTGTCGGATCAAACTCGAATTGAAATTGTAAACCTTCCAATTTCTTCTGTTGGAAAGCCA
GATATTTCCGAAGAACCTAATGGTCGTTTTGTTGTGTATGTAAATGGATTTATTGATCCTGTTACTTACGCTAAAGGGCG
ATTAATTACGGTGATTGGTCAGGCTGATGGTATTGAGCAGGCCAACGTAGGTGAATTTGTTTATCCTTTTCCAGTCATTC
AAGCATCGGCCATTCATCTATGGCAAATACAAGAGTATGTAGTGACTAATGATTTGGATATGGACTATATGCCATGCGCT
GGTGCTCGTTGTTTTCATCAAAGAAGCCACCTTGAAACCCGTCGTGGCAAAGTGGTACAGGAAGTGAAGTAA

Upstream 100 bases:

>100_bases
AATTAGTCGGTGTCGATCTCTATATATAACGCTAATCCATACCTTTATGTAACTCACATCTTATGTGAATTGGTATGACT
TCAATTATGAGAGGTTCAAT

Downstream 100 bases:

>100_bases
ACGCTGATGCCATTGTTTCATGAAAGATCACTGCCTCTTTACCATGGTGAAATAGCCTTACTTGAAGTTAAACCTGAACA
GGTCGATCAAACGATTCTGT

Product: outer membrane protein Slp precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKQVIYFLSVLLLVGCSSLPQELKSTQATTLVEYNAFSDAANAGEKAEVRLGGVIARLDNLSDQTRIEIVNLPISSVGKP
DISEEPNGRFVVYVNGFIDPVTYAKGRLITVIGQADGIEQANVGEFVYPFPVIQASAIHLWQIQEYVVTNDLDMDYMPCA
GARCFHQRSHLETRRGKVVQEVK

Sequences:

>Translated_183_residues
MKQVIYFLSVLLLVGCSSLPQELKSTQATTLVEYNAFSDAANAGEKAEVRLGGVIARLDNLSDQTRIEIVNLPISSVGKP
DISEEPNGRFVVYVNGFIDPVTYAKGRLITVIGQADGIEQANVGEFVYPFPVIQASAIHLWQIQEYVVTNDLDMDYMPCA
GARCFHQRSHLETRRGKVVQEVK
>Mature_183_residues
MKQVIYFLSVLLLVGCSSLPQELKSTQATTLVEYNAFSDAANAGEKAEVRLGGVIARLDNLSDQTRIEIVNLPISSVGKP
DISEEPNGRFVVYVNGFIDPVTYAKGRLITVIGQADGIEQANVGEFVYPFPVIQASAIHLWQIQEYVVTNDLDMDYMPCA
GARCFHQRSHLETRRGKVVQEVK

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=155, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI87082278, Length=147, Percent_Identity=29.9319727891156, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20232; Mature: 20232

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVIYFLSVLLLVGCSSLPQELKSTQATTLVEYNAFSDAANAGEKAEVRLGGVIARLDN
CHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHC
LSDQTRIEIVNLPISSVGKPDISEEPNGRFVVYVNGFIDPVTYAKGRLITVIGQADGIEQ
CCCCCEEEEEECCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
ANVGEFVYPFPVIQASAIHLWQIQEYVVTNDLDMDYMPCAGARCFHQRSHLETRRGKVVQ
CCCCCEECCCCHHHHCEEEEEEHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
EVK
CCC
>Mature Secondary Structure
MKQVIYFLSVLLLVGCSSLPQELKSTQATTLVEYNAFSDAANAGEKAEVRLGGVIARLDN
CHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHC
LSDQTRIEIVNLPISSVGKPDISEEPNGRFVVYVNGFIDPVTYAKGRLITVIGQADGIEQ
CCCCCEEEEEECCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
ANVGEFVYPFPVIQASAIHLWQIQEYVVTNDLDMDYMPCAGARCFHQRSHLETRRGKVVQ
CCCCCEECCCCHHHHCEEEEEEHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
EVK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]