Click here to switch to the map view.

The map label for this gene is 59712316

Identifier: 59712316

GI number: 59712316

Start: 1926075

End: 1926944

Strand: Reverse

Name: 59712316

Synonym: VF_1709

Alternate gene names: NA

Gene position: 1926944-1926075 (Counterclockwise)

Preceding gene: 59712317

Following gene: 59712315

Centisome position: 66.5

GC content: 37.36

Gene sequence:

>870_bases
ATGCCATTGTTTCATGAAAGATCACTGCCTCTTTACCATGGTGAAATAGCCTTACTTGAAGTTAAACCTGAACAGGTCGA
TCAAACGATTCTGTTTTTACATGGTTGGCAAGATAATGCGGCGACGTTTCTTACCACAATGGAATCGTACGCAAAGACGA
ATCCAACCCACCATTTGATTGCGTTTGACTGGTTTGGGCATGGATTGTCCTCTCATAAAGGTGGGGATAATTTTTATCAC
TTTTTTGATTATATTGATGATCTTCACCAAGTTATCCTACATTTAAATCAACAATCCGTTATTTTGGTTGGACATTCTTT
AGGTGGCTTAATTGCTAGTGCTTATTGTGCTGCTTTTCCAGAGAAAGTATCAGCTCTAATGATGATAGAAGCACTAGGGC
CTTTGAGTGAAGATGAGAGCCAAATAACAGATAGATTGCGTCAAGGTATATCAAGTCGTCAGCGTTACCGAAATAAACCG
CAAAGAAGATTAAAAGACGCTCAATCGGCTTTAGAGTTAAGAGCTAAAGTTAATCAGTTACCTCAGTCTCTTATTGAGCC
GATGGTTTTACGTTCATTAAGAGTAGAATCTGAATATGTTCAATGGACCACAGATGCGAAAGTAAAGTGTGATTCTTTAT
ATCGAATGTCGGAAACACACGCTTTAGCACTATTGGATAAAATTGAATGTCCAGTGTTTGCCGTAGTTGGGCAGAATGGC
TATGGTCATTTAAAACAGAAAGAACACAGATATAAATTTATTGCGGATTTTACCTGTTATCACATTAAAGGTGGTCACCA
TTGTCATTTGGAAAACCCAAATTTAATAAGTGAGCACTTAACCACATTAATTAACACTATTACTACATAA

Upstream 100 bases:

>100_bases
TATGGACTATATGCCATGCGCTGGTGCTCGTTGTTTTCATCAAAGAAGCCACCTTGAAACCCGTCGTGGCAAAGTGGTAC
AGGAAGTGAAGTAAACGCTG

Downstream 100 bases:

>100_bases
ATACTTCACATCTTTAAAAAAAGCCCTCATTCTTGTTTAAAAAAACATCGAATGAATAATTGTGAATAAAAATAGTTGAC
TAAAATTGTAGAGTAAATAG

Product: hydrolase

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Hydrolase/Acyltransferase; Lipase A; Lipase; Beta-Ketoacyl Synthase; Hydrolase Protein; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Family Protein; Lipase LipA; Hydrolase Alpha/Beta Fold Family Protein; Epoxide Hydrolase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Fold Hydrolase Family Protein; Polyketide Synthase

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPLFHERSLPLYHGEIALLEVKPEQVDQTILFLHGWQDNAATFLTTMESYAKTNPTHHLIAFDWFGHGLSSHKGGDNFYH
FFDYIDDLHQVILHLNQQSVILVGHSLGGLIASAYCAAFPEKVSALMMIEALGPLSEDESQITDRLRQGISSRQRYRNKP
QRRLKDAQSALELRAKVNQLPQSLIEPMVLRSLRVESEYVQWTTDAKVKCDSLYRMSETHALALLDKIECPVFAVVGQNG
YGHLKQKEHRYKFIADFTCYHIKGGHHCHLENPNLISEHLTTLINTITT

Sequences:

>Translated_289_residues
MPLFHERSLPLYHGEIALLEVKPEQVDQTILFLHGWQDNAATFLTTMESYAKTNPTHHLIAFDWFGHGLSSHKGGDNFYH
FFDYIDDLHQVILHLNQQSVILVGHSLGGLIASAYCAAFPEKVSALMMIEALGPLSEDESQITDRLRQGISSRQRYRNKP
QRRLKDAQSALELRAKVNQLPQSLIEPMVLRSLRVESEYVQWTTDAKVKCDSLYRMSETHALALLDKIECPVFAVVGQNG
YGHLKQKEHRYKFIADFTCYHIKGGHHCHLENPNLISEHLTTLINTITT
>Mature_288_residues
PLFHERSLPLYHGEIALLEVKPEQVDQTILFLHGWQDNAATFLTTMESYAKTNPTHHLIAFDWFGHGLSSHKGGDNFYHF
FDYIDDLHQVILHLNQQSVILVGHSLGGLIASAYCAAFPEKVSALMMIEALGPLSEDESQITDRLRQGISSRQRYRNKPQ
RRLKDAQSALELRAKVNQLPQSLIEPMVLRSLRVESEYVQWTTDAKVKCDSLYRMSETHALALLDKIECPVFAVVGQNGY
GHLKQKEHRYKFIADFTCYHIKGGHHCHLENPNLISEHLTTLINTITT

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24667992, Length=300, Percent_Identity=26, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21357291, Length=299, Percent_Identity=25.4180602006689, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24667999, Length=303, Percent_Identity=24.7524752475248, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17137390, Length=279, Percent_Identity=24.3727598566308, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24655886, Length=280, Percent_Identity=25, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24655874, Length=288, Percent_Identity=24.3055555555556, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356953, Length=261, Percent_Identity=23.7547892720307, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32987; Mature: 32856

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFHERSLPLYHGEIALLEVKPEQVDQTILFLHGWQDNAATFLTTMESYAKTNPTHHLI
CCCCCCCCCCEEECCEEEEEECHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE
AFDWFGHGLSSHKGGDNFYHFFDYIDDLHQVILHLNQQSVILVGHSLGGLIASAYCAAFP
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
EKVSALMMIEALGPLSEDESQITDRLRQGISSRQRYRNKPQRRLKDAQSALELRAKVNQL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
PQSLIEPMVLRSLRVESEYVQWTTDAKVKCDSLYRMSETHALALLDKIECPVFAVVGQNG
HHHHHHHHHHHHHHCCHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
YGHLKQKEHRYKFIADFTCYHIKGGHHCHLENPNLISEHLTTLINTITT
CCCCCHHHHHHEEEEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLFHERSLPLYHGEIALLEVKPEQVDQTILFLHGWQDNAATFLTTMESYAKTNPTHHLI
CCCCCCCCCEEECCEEEEEECHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE
AFDWFGHGLSSHKGGDNFYHFFDYIDDLHQVILHLNQQSVILVGHSLGGLIASAYCAAFP
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
EKVSALMMIEALGPLSEDESQITDRLRQGISSRQRYRNKPQRRLKDAQSALELRAKVNQL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
PQSLIEPMVLRSLRVESEYVQWTTDAKVKCDSLYRMSETHALALLDKIECPVFAVVGQNG
HHHHHHHHHHHHHHCCHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
YGHLKQKEHRYKFIADFTCYHIKGGHHCHLENPNLISEHLTTLINTITT
CCCCCHHHHHHEEEEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA