| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is minE
Identifier: 59712313
GI number: 59712313
Start: 1922623
End: 1922886
Strand: Direct
Name: minE
Synonym: VF_1706
Alternate gene names: 59712313
Gene position: 1922623-1922886 (Clockwise)
Preceding gene: 59712312
Following gene: 59712321
Centisome position: 66.35
GC content: 35.23
Gene sequence:
>264_bases ATGGCATTGCTTGAGTTTTTTAGACCACAGAAAAAAGCCACTGCTAACATAGCTAAGGAAAGGCTACAGATTATTGTTGC AGAACGTCGAAATGGCGGCCCTGCACCATCATATTTACCTCAACTTAAAGAAGATATTCTTAAAGTGATCAGTAAATATG TTGAAGTAAATCCTGATATGGTTACTGTTTCTTTAGAACAAAAAGAAGAAGATTTATCGGTTTTAGAATTGAATGTTACT CTTCCTGACGAAGACGATCATTAA
Upstream 100 bases:
>100_bases ATCAAGATGCTGTCGATCGCTTATTAGGTAAAGAAGTATCATTCCGTTTCTTAGAAGAAGAGAAAAAAGGCATCTTTAAA CGACTATTTGGAGGTTAAGC
Downstream 100 bases:
>100_bases ACTGACAATACAGTTTTAAACGTGCATTAAAAAGGTGACTCATGAGTCACCTTTTTTTATTTTTGAACTGCTACTTTTCA ATCACAGACATAAAGCGCGC
Product: cell division topological specificity factor MinE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKEDILKVISKYVEVNPDMVTVSLEQKEEDLSVLELNVT LPDEDDH
Sequences:
>Translated_87_residues MALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKEDILKVISKYVEVNPDMVTVSLEQKEEDLSVLELNVT LPDEDDH >Mature_86_residues ALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKEDILKVISKYVEVNPDMVTVSLEQKEEDLSVLELNVTL PDEDDH
Specific function: Prevents the cell division inhibition by proteins minC and minD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the l
COG id: COG0851
COG function: function code D; Septum formation topological specificity factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minE family
Homologues:
Organism=Escherichia coli, GI1787422, Length=86, Percent_Identity=67.4418604651163, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINE_VIBF1 (Q5E445)
Other databases:
- EMBL: CP000020 - RefSeq: YP_205089.1 - HSSP: P0A734 - ProteinModelPortal: Q5E445 - SMR: Q5E445 - STRING: Q5E445 - GeneID: 3277667 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_1706 - NMPDR: fig|312309.3.peg.1706 - eggNOG: COG0851 - HOGENOM: HBG449956 - OMA: AHERVEN - PhylomeDB: Q5E445 - ProtClustDB: PRK00296 - BioCyc: VFIS312309:VF1706-MONOMER - HAMAP: MF_00262 - InterPro: IPR005527 - TIGRFAMs: TIGR01215
Pfam domain/function: PF03776 MinE
EC number: NA
Molecular weight: Translated: 9889; Mature: 9758
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKEDILKVISKYVEVNPDM CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE VTVSLEQKEEDLSVLELNVTLPDEDDH EEEEECCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure ALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKEDILKVISKYVEVNPDM CCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE VTVSLEQKEEDLSVLELNVTLPDEDDH EEEEECCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA