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The map label for this gene is cvpA [H]

Identifier: 59712299

GI number: 59712299

Start: 1905136

End: 1905627

Strand: Reverse

Name: cvpA [H]

Synonym: VF_1692

Alternate gene names: 59712299

Gene position: 1905627-1905136 (Counterclockwise)

Preceding gene: 59712300

Following gene: 59712298

Centisome position: 65.77

GC content: 36.99

Gene sequence:

>492_bases
ATGATTTGGATCGATTTTGTCATTTTAGGCGTTATTAGCCTGTCAGCTTTAATCAGTTTGATTAGAGGTTTTGTAAAAGA
AGCGTTGTCTTTGGTTATTTGGTTTGGTGCATTTTTTATTGCCAGTAACTTTTATCCAAAGCTAGCTGTTTATTTCACAA
ACATACATGATGAAATGATAAGAAATGGCAGTGCGATAGCTGCTTTGTTTGTGGCAACCTTAATTGTTGGTGCGGTTGTG
AACTACGTGGTAGGTCAATTAGTACAGAAAACAGGGTTGTCGGGAACAGATAGAATTTTAGGTATTGTTTTTGGGGGATT
AAGAGGCGTGTTAATTATAGCCGCTGTTCTGTTCTTCATTGATGCCTTTACTTCTTTATCAGATTCAGAGTGGTGGAAGC
AATCACAATTAATACCGCAATTCTCGGTAGTAATTGAATGGTTCTTCGATTACTTAAAGGATACATCAAGTTTTCTTCCT
GGCGCTAAATAG

Upstream 100 bases:

>100_bases
AATGGTCAATTGCTTAAATTTACACCACTAAACCCATAAGAAAACGTTTGCGTAGCGGATTTTTCTGTTAAAATGCGCAG
CAACAGAGAAAAGATAAATT

Downstream 100 bases:

>100_bases
CGCCAGTTTTTTAGCAAATTGAGGACTCTAGGACATGTGCGGTATTGTTGGAATCGTGGGCGCAACACCAGTAAACCAGT
CAATCTATGACGCTTTAACA

Product: membrane protein required for colicin V production

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIWIDFVILGVISLSALISLIRGFVKEALSLVIWFGAFFIASNFYPKLAVYFTNIHDEMIRNGSAIAALFVATLIVGAVV
NYVVGQLVQKTGLSGTDRILGIVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK

Sequences:

>Translated_163_residues
MIWIDFVILGVISLSALISLIRGFVKEALSLVIWFGAFFIASNFYPKLAVYFTNIHDEMIRNGSAIAALFVATLIVGAVV
NYVVGQLVQKTGLSGTDRILGIVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK
>Mature_163_residues
MIWIDFVILGVISLSALISLIRGFVKEALSLVIWFGAFFIASNFYPKLAVYFTNIHDEMIRNGSAIAALFVATLIVGAVV
NYVVGQLVQKTGLSGTDRILGIVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=162, Percent_Identity=66.6666666666667, Blast_Score=227, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18008; Mature: 18008

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWIDFVILGVISLSALISLIRGFVKEALSLVIWFGAFFIASNFYPKLAVYFTNIHDEMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RNGSAIAALFVATLIVGAVVNYVVGQLVQKTGLSGTDRILGIVFGGLRGVLIIAAVLFFI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLPGAK
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIWIDFVILGVISLSALISLIRGFVKEALSLVIWFGAFFIASNFYPKLAVYFTNIHDEMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RNGSAIAALFVATLIVGAVVNYVVGQLVQKTGLSGTDRILGIVFGGLRGVLIIAAVLFFI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLPGAK
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]