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The map label for this gene is dedD [H]

Identifier: 59712300

GI number: 59712300

Start: 1905689

End: 1906246

Strand: Reverse

Name: dedD [H]

Synonym: VF_1693

Alternate gene names: 59712300

Gene position: 1906246-1905689 (Counterclockwise)

Preceding gene: 59712301

Following gene: 59712299

Centisome position: 65.79

GC content: 37.1

Gene sequence:

>558_bases
GTGTCTAGTCCATTTCAACGACGTTTAGTCGGAACCATAATATTGGTTGCTATTGGGGTAATTGTTTTACCTGATGTATT
TGATGGTAAGAAGAAACATTATCAAGAAGAGTTTGCAAGTATTCCAATTAAGCCTGAACTTTCTAAAGATGTAGAGCAAT
TCGAAATCCAAGAACCTGTGGATTTTGATGCTGAACTTCCTGGAGAGCCAGTTGAAGTTACAATTAAATCGTCACCAGCT
GAGCCTGAAAAAGAGACGTTAACGATTGTTGAGAAAAAACAGCCGCAACCTTCGAAAGTTGATTATGCAAAAAGTGCATG
GATCATTCAATTAGGTGTATTTAGAAACGCAGATAACGCAAAAAATCTTGCTCTTAAACTGCGTAAACAAGGTTATCAAG
CGCATACTTTCCCTAAAGATCCGAAACCAGGTGATTTAGTTCGAGTTGCTGTTGGACCAGATGTTTCTAAACCTGATCTT
GAAAAGCTGTTGCCAAAATTAAAAGAAATAACTGGCTTAAATGGTCAATTGCTTAAATTTACACCACTAAACCCATAA

Upstream 100 bases:

>100_bases
ACAGCAGGCTGAAAATGATGATTTAATTTTAGTCTTCGGATCATTCCACACTGTCGGTGAAGTATGGGATTATTGGAAAA
AAGAAGCATGAGGAATATGA

Downstream 100 bases:

>100_bases
GAAAACGTTTGCGTAGCGGATTTTTCTGTTAAAATGCGCAGCAACAGAGAAAAGATAAATTATGATTTGGATCGATTTTG
TCATTTTAGGCGTTATTAGC

Product: DedD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSSPFQRRLVGTIILVAIGVIVLPDVFDGKKKHYQEEFASIPIKPELSKDVEQFEIQEPVDFDAELPGEPVEVTIKSSPA
EPEKETLTIVEKKQPQPSKVDYAKSAWIIQLGVFRNADNAKNLALKLRKQGYQAHTFPKDPKPGDLVRVAVGPDVSKPDL
EKLLPKLKEITGLNGQLLKFTPLNP

Sequences:

>Translated_185_residues
MSSPFQRRLVGTIILVAIGVIVLPDVFDGKKKHYQEEFASIPIKPELSKDVEQFEIQEPVDFDAELPGEPVEVTIKSSPA
EPEKETLTIVEKKQPQPSKVDYAKSAWIIQLGVFRNADNAKNLALKLRKQGYQAHTFPKDPKPGDLVRVAVGPDVSKPDL
EKLLPKLKEITGLNGQLLKFTPLNP
>Mature_184_residues
SSPFQRRLVGTIILVAIGVIVLPDVFDGKKKHYQEEFASIPIKPELSKDVEQFEIQEPVDFDAELPGEPVEVTIKSSPAE
PEKETLTIVEKKQPQPSKVDYAKSAWIIQLGVFRNADNAKNLALKLRKQGYQAHTFPKDPKPGDLVRVAVGPDVSKPDLE
KLLPKLKEITGLNGQLLKFTPLNP

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=46, Percent_Identity=69.5652173913043, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 20587; Mature: 20456

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPFQRRLVGTIILVAIGVIVLPDVFDGKKKHYQEEFASIPIKPELSKDVEQFEIQEPV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
DFDAELPGEPVEVTIKSSPAEPEKETLTIVEKKQPQPSKVDYAKSAWIIQLGVFRNADNA
CCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCH
KNLALKLRKQGYQAHTFPKDPKPGDLVRVAVGPDVSKPDLEKLLPKLKEITGLNGQLLKF
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE
TPLNP
ECCCC
>Mature Secondary Structure 
SSPFQRRLVGTIILVAIGVIVLPDVFDGKKKHYQEEFASIPIKPELSKDVEQFEIQEPV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
DFDAELPGEPVEVTIKSSPAEPEKETLTIVEKKQPQPSKVDYAKSAWIIQLGVFRNADNA
CCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCH
KNLALKLRKQGYQAHTFPKDPKPGDLVRVAVGPDVSKPDLEKLLPKLKEITGLNGQLLKF
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE
TPLNP
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]