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The map label for this gene is yejK [C]

Identifier: 59712255

GI number: 59712255

Start: 1856313

End: 1857371

Strand: Reverse

Name: yejK [C]

Synonym: VF_1648

Alternate gene names: 59712255

Gene position: 1857371-1856313 (Counterclockwise)

Preceding gene: 59712260

Following gene: 59712254

Centisome position: 64.1

GC content: 36.17

Gene sequence:

>1059_bases
ATGATAACCTACTATGTACGTCAACTAAAAACCTTTTCTATTATGAGTTTAACCCTTTCAAACGTAATTTTACATAAATT
AGTAAAAAATGAGCAAGATGAACTTGAAGTTTGTCTAAGAAATCAAACTCTTGAGAACGAAGAGTTCACAGAAGCCCTTG
TTTCTGAGTTACATCGTGTATTTAATTCAAAAGCGGGTAAAGGCTTCGGTGTTTTCAAAACTGAAAGTGAGTTTGGTCAT
TGGTTATCATCTGTTCGCAAGAACGAAACGCCTTTTTTAGAGTTTAGCAACAATTCAGCAGAGAAGTTAAAATCTGAGCT
GATTAAATATCCATTCGCAGAAGAAGGTATTTTAGTTATTGCTGAATACCAATCATTGGCTACTGAATACCTGTTTGTCG
CGGTATTACCATCAAATGAAAGTATGAAAGTCACTGAGCAGTTAGATATTAGTGCGACTGATTATCTTGATATTGCAAAA
ATGGATATTGCTGCACGTATTGATTTATCAACTTGGGAAACCGATTCAGATTCGAATCGTTACCTGACTTTCATTAAGGG
TCGTGTTGGTCGTAAGGTCTCTGATTTCTTCTTAGATTTCTTACAAGCTGATGTTGGTATGGATACTAAGGTTCAAAACC
AAGTATTAATGCAAGCGGTTGAAGATTTTTGTGCTGACGAACGTTTAGACCAAGAAGAAAAACAACCATATCGCAAACAA
GTTTATGATTACTGTAATGGTCAGCTTCAAGCTGGTGAAGAGTTAACAGTTAAAGAGCTAGCTAGTGAATTACCAACGTC
TGAGTCAGGCTCAAATTTTTATCAATTTGCAGAAGAGCAAGGATATGAATTAGAAGAGTCTTTCCCTGTTGATCGTACCG
CATTACGAAAATTAACAAAATTTGTTGGTGCTGGTGGTGGTTTATCATTAAATTTTGATGCAATGCTGCTTGGTGAGCGT
GTTTTTTATGATCCAGAAACGGATACGTTAACAATCAAGGGCACTCCGCCAAATCTTAAAGATCAATTAACGCGTCGATT
AGGTTCTTCTGAATCATAA

Upstream 100 bases:

>100_bases
TCGACCATCTCTGTTAACATTTGTTCAATTTGTTTGTTGCTGTATTTTGAAGTAATAGCCATAAGTCTTTTCAGTCAGTT
AATGATAGTGAAAGCGGCTT

Downstream 100 bases:

>100_bases
TTGTTGCTTATATGATCAAAAGTAAGCTGTCTATTTGAGTGCGTTTTGACAACTCTTCTCAAATATTTGATAGCTTGCTT
TTTACAAAATGATACCCTAT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGH
WLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAK
MDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDQEEKQPYRKQ
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGER
VFYDPETDTLTIKGTPPNLKDQLTRRLGSSES

Sequences:

>Translated_352_residues
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGH
WLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAK
MDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDQEEKQPYRKQ
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGER
VFYDPETDTLTIKGTPPNLKDQLTRRLGSSES
>Mature_352_residues
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGH
WLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAK
MDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDQEEKQPYRKQ
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGER
VFYDPETDTLTIKGTPPNLKDQLTRRLGSSES

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=332, Percent_Identity=56.3253012048193, Blast_Score=383, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 40038; Mature: 40038

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FNSKAGKGFGVFKTESEFGHWLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVI
HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEE
AEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAKMDIAARIDLSTWETDSDSNR
ECHHHHHHEEEEEEEECCCCCEEEHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCC
YLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDQEEKQPYRKQ
EEEEECCHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTK
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCCCCCHHHHHHHHH
FVGAGGGLSLNFDAMLLGERVFYDPETDTLTIKGTPPNLKDQLTRRLGSSES
HHCCCCCCEECCHHEEECCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FNSKAGKGFGVFKTESEFGHWLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVI
HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEE
AEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAKMDIAARIDLSTWETDSDSNR
ECHHHHHHEEEEEEEECCCCCEEEHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCC
YLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDQEEKQPYRKQ
EEEEECCHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHH
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTK
HHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCCCCCHHHHHHHHH
FVGAGGGLSLNFDAMLLGERVFYDPETDTLTIKGTPPNLKDQLTRRLGSSES
HHCCCCCCEECCHHEEECCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA