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The map label for this gene is mipA [H]

Identifier: 59712239

GI number: 59712239

Start: 1835004

End: 1835822

Strand: Reverse

Name: mipA [H]

Synonym: VF_1632

Alternate gene names: 59712239

Gene position: 1835822-1835004 (Counterclockwise)

Preceding gene: 59712240

Following gene: 59712237

Centisome position: 63.36

GC content: 38.71

Gene sequence:

>819_bases
ATGGCGTGTGATTATGTACAATCGTACGCTGTATTGTTAATTCTGTGGTTATATAAGGTTGTCATTGTGAGTAAGTTAAT
AAGTCGCTCTGTTTTTTGTCTTTTGGTGTTATTCAATAGCAGTGCTAATGCAAAAATTTCACAATGGTCTCTTGGTGCCG
CCGCTGCATATTCCCCTTCCTTTTATAAAGAGACGCCTTCGAATGCAACCATTATTCCTATGGTTGGTTATGAGGGGGAA
CATCTATTCCTTAGAGGGTTTAGTGGTGGTTATCGCCTAAAACCAGTAGGTTCACCTCAAAATATAATATTTCGATTTGT
CTATGATCCTAGAACGTTTAAGCCTAATGATTCAAACGATGCTGCAATGCAAAAATTAGATGAACGTAAGAGTACCGTAC
TTGGTGGCATGAGCTATCAGATGGTTACTCATATTGGAATTATAGAGTTAACAGGAGGAACAGATGTAGGTCGTACTCAT
AATGGTCTTTATGCAGAAGCGGCTTGGCGTTTACCAATAAGAGGGAGAGGGTGGGCAATTACACCATCATTAGGATATTC
ATATAATAGTGAGAAATTAAATAATCATTTATATGGAGTATCCAATGAAGAAGCGTTACGAACTGGAGTTGACCAATTTA
ATGCAGATTGGGATGGACAGTTTTTTATTGGATTATCTACTTATTTCCACATTACACCAAATGTTCGAGTGACTGGCGGT
TTGCGTTATGTGAACCTTGAGGGGAACCTAGAAAACAGTCCAATGATTGAGCATACAACAAGTTCAACAGGTAGTGTCGG
TATAGTGTACGTGTTCTAG

Upstream 100 bases:

>100_bases
AGAGAAGATGATAGTTAATCCGATTTAAAATTGAATAAAGCAGGCACTTAGCCTGCTTTTTTTATATCTAAAATAAACAA
AAAACCTAAATAACTATGAA

Downstream 100 bases:

>100_bases
GAATTTTTATATATTATTTAGTTCGTTTTATTAATGAGTAAGAGCTTATGATTTATAGAAAAGATTACTATTAATAATAG
TATTAATATTTGAGTATTAA

Product: scaffolding protein for murein synthesizing machinery

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MACDYVQSYAVLLILWLYKVVIVSKLISRSVFCLLVLFNSSANAKISQWSLGAAAAYSPSFYKETPSNATIIPMVGYEGE
HLFLRGFSGGYRLKPVGSPQNIIFRFVYDPRTFKPNDSNDAAMQKLDERKSTVLGGMSYQMVTHIGIIELTGGTDVGRTH
NGLYAEAAWRLPIRGRGWAITPSLGYSYNSEKLNNHLYGVSNEEALRTGVDQFNADWDGQFFIGLSTYFHITPNVRVTGG
LRYVNLEGNLENSPMIEHTTSSTGSVGIVYVF

Sequences:

>Translated_272_residues
MACDYVQSYAVLLILWLYKVVIVSKLISRSVFCLLVLFNSSANAKISQWSLGAAAAYSPSFYKETPSNATIIPMVGYEGE
HLFLRGFSGGYRLKPVGSPQNIIFRFVYDPRTFKPNDSNDAAMQKLDERKSTVLGGMSYQMVTHIGIIELTGGTDVGRTH
NGLYAEAAWRLPIRGRGWAITPSLGYSYNSEKLNNHLYGVSNEEALRTGVDQFNADWDGQFFIGLSTYFHITPNVRVTGG
LRYVNLEGNLENSPMIEHTTSSTGSVGIVYVF
>Mature_271_residues
ACDYVQSYAVLLILWLYKVVIVSKLISRSVFCLLVLFNSSANAKISQWSLGAAAAYSPSFYKETPSNATIIPMVGYEGEH
LFLRGFSGGYRLKPVGSPQNIIFRFVYDPRTFKPNDSNDAAMQKLDERKSTVLGGMSYQMVTHIGIIELTGGTDVGRTHN
GLYAEAAWRLPIRGRGWAITPSLGYSYNSEKLNNHLYGVSNEEALRTGVDQFNADWDGQFFIGLSTYFHITPNVRVTGGL
RYVNLEGNLENSPMIEHTTSSTGSVGIVYVF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=244, Percent_Identity=31.5573770491803, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790010, Length=248, Percent_Identity=29.4354838709677, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 30171; Mature: 30039

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACDYVQSYAVLLILWLYKVVIVSKLISRSVFCLLVLFNSSANAKISQWSLGAAAAYSPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCC
FYKETPSNATIIPMVGYEGEHLFLRGFSGGYRLKPVGSPQNIIFRFVYDPRTFKPNDSND
HHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCH
AAMQKLDERKSTVLGGMSYQMVTHIGIIELTGGTDVGRTHNGLYAEAAWRLPIRGRGWAI
HHHHHHHHHHHHHHCCCCEEEEHEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE
TPSLGYSYNSEKLNNHLYGVSNEEALRTGVDQFNADWDGQFFIGLSTYFHITPNVRVTGG
CCCCCCCCCHHHHCCCCCCCCCHHHHHHCHHHCCCCCCCEEEEEEEEEEEECCCEEEECC
LRYVNLEGNLENSPMIEHTTSSTGSVGIVYVF
EEEEEECCCCCCCCEEEEECCCCCCEEEEEEC
>Mature Secondary Structure 
ACDYVQSYAVLLILWLYKVVIVSKLISRSVFCLLVLFNSSANAKISQWSLGAAAAYSPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCCC
FYKETPSNATIIPMVGYEGEHLFLRGFSGGYRLKPVGSPQNIIFRFVYDPRTFKPNDSND
HHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCH
AAMQKLDERKSTVLGGMSYQMVTHIGIIELTGGTDVGRTHNGLYAEAAWRLPIRGRGWAI
HHHHHHHHHHHHHHCCCCEEEEHEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE
TPSLGYSYNSEKLNNHLYGVSNEEALRTGVDQFNADWDGQFFIGLSTYFHITPNVRVTGG
CCCCCCCCCHHHHCCCCCCCCCHHHHHHCHHHCCCCCCCEEEEEEEEEEEECCCEEEECC
LRYVNLEGNLENSPMIEHTTSSTGSVGIVYVF
EEEEEECCCCCCCCEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]