| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is folE [H]
Identifier: 59712214
GI number: 59712214
Start: 1803595
End: 1804248
Strand: Reverse
Name: folE [H]
Synonym: VF_1607
Alternate gene names: 59712214
Gene position: 1804248-1803595 (Counterclockwise)
Preceding gene: 59712221
Following gene: 59712212
Centisome position: 62.27
GC content: 39.91
Gene sequence:
>654_bases ATGTCATCACTTAGTGAATCAGCCATATTAGTGCGTGATGCTCTTGTTGCACGTGGTCTTGAGACGCCAATGAAAGAAAA TGGTGTTAGTCGAGAAGAGAAAAAAGAGCGCATCGAAGAGCATATGCGTGAGATCCTAACCCTATTAAGTCTTGATCTTA GTGATGATAGTTTAGAAGAAACGCCACACCGTATTGCAAAAATGTATGTGGATGAGATTTTCTCTGGGCTAGATTATGCC AATTTCCCTAAAATTACAGTGATTGAAAATAAGATGAACTGTGATGAGATGGTTCGTGTTAATGATATTACGTTAACCAG TACTTGCGAACATCACTTAGTGACAATTGATGGTAAAGCGACGGTTGCTTATATTCCTCGTGGAAAGATCATCGGATTAT CTAAAATTAACCGCATTGTTCGATTCTTCGCTCAACGTCCACAAGTACAAGAACGCATGACTCAGCAAATACTTGTGGCT TTACAAACCTTATTAGGTAGTGACGATGTAGCTATTACTATGGAAGCAACGCACTATTGTGTTAAGTCTCGTGGTGTAAT GGATGCAACAAGTAGTACAACAACGACTGCACTTGGTGGGATCTTTAAGAGAAACCCAGCGACAAGACACGAGTTTTTAA GCGGTATTCGTTAA
Upstream 100 bases:
>100_bases CTTTAACATCTAATAGACCTAGTAAAATCAGGGTGTATTTATTTGATAGAGGAGGTATCCTTAGCGAAGTTCAATTGATT ATGGAATTTTGGAGTATACG
Downstream 100 bases:
>100_bases ATACAGCCATCTTGTTAAATATCACAATAAAGTAAACATTAAAAAAGCCAGTGACCTTGGCAAAGAGGTCACTGGCTTTT TCTTATGTGTTTTTAGAGTA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSSLSESAILVRDALVARGLETPMKENGVSREEKKERIEEHMREILTLLSLDLSDDSLEETPHRIAKMYVDEIFSGLDYA NFPKITVIENKMNCDEMVRVNDITLTSTCEHHLVTIDGKATVAYIPRGKIIGLSKINRIVRFFAQRPQVQERMTQQILVA LQTLLGSDDVAITMEATHYCVKSRGVMDATSSTTTTALGGIFKRNPATRHEFLSGIR
Sequences:
>Translated_217_residues MSSLSESAILVRDALVARGLETPMKENGVSREEKKERIEEHMREILTLLSLDLSDDSLEETPHRIAKMYVDEIFSGLDYA NFPKITVIENKMNCDEMVRVNDITLTSTCEHHLVTIDGKATVAYIPRGKIIGLSKINRIVRFFAQRPQVQERMTQQILVA LQTLLGSDDVAITMEATHYCVKSRGVMDATSSTTTTALGGIFKRNPATRHEFLSGIR >Mature_216_residues SSLSESAILVRDALVARGLETPMKENGVSREEKKERIEEHMREILTLLSLDLSDDSLEETPHRIAKMYVDEIFSGLDYAN FPKITVIENKMNCDEMVRVNDITLTSTCEHHLVTIDGKATVAYIPRGKIIGLSKINRIVRFFAQRPQVQERMTQQILVAL QTLLGSDDVAITMEATHYCVKSRGVMDATSSTTTTALGGIFKRNPATRHEFLSGIR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=180, Percent_Identity=40.5555555555556, Blast_Score=124, Evalue=5e-29, Organism=Homo sapiens, GI4503949, Length=180, Percent_Identity=40.5555555555556, Blast_Score=124, Evalue=5e-29, Organism=Homo sapiens, GI66932970, Length=155, Percent_Identity=37.4193548387097, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI66932972, Length=140, Percent_Identity=39.2857142857143, Blast_Score=87, Evalue=9e-18, Organism=Escherichia coli, GI1788476, Length=219, Percent_Identity=71.689497716895, Blast_Score=314, Evalue=3e-87, Organism=Caenorhabditis elegans, GI17560486, Length=200, Percent_Identity=38.5, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=43.0939226519337, Blast_Score=130, Evalue=1e-31, Organism=Drosophila melanogaster, GI24656796, Length=120, Percent_Identity=48.3333333333333, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24656782, Length=120, Percent_Identity=48.3333333333333, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24656791, Length=120, Percent_Identity=48.3333333333333, Blast_Score=112, Evalue=1e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24355; Mature: 24224
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSESAILVRDALVARGLETPMKENGVSREEKKERIEEHMREILTLLSLDLSDDSLEE CCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TPHRIAKMYVDEIFSGLDYANFPKITVIENKMNCDEMVRVNDITLTSTCEHHLVTIDGKA HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHEEECCEEEECCCCCEEEEECCCE TVAYIPRGKIIGLSKINRIVRFFAQRPQVQERMTQQILVALQTLLGSDDVAITMEATHYC EEEEECCCCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH VKSRGVMDATSSTTTTALGGIFKRNPATRHEFLSGIR HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure SSLSESAILVRDALVARGLETPMKENGVSREEKKERIEEHMREILTLLSLDLSDDSLEE CCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TPHRIAKMYVDEIFSGLDYANFPKITVIENKMNCDEMVRVNDITLTSTCEHHLVTIDGKA HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHEEECCEEEECCCCCEEEEECCCE TVAYIPRGKIIGLSKINRIVRFFAQRPQVQERMTQQILVALQTLLGSDDVAITMEATHYC EEEEECCCCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH VKSRGVMDATSSTTTTALGGIFKRNPATRHEFLSGIR HHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA